This term is obsolete.

GO:0019904 JSON

protein domain specific binding

Molecular Function

Definition (GO:0019904 GONUTS page)

Binding to a specific domain of a protein.

204,664 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
protein domain-specific binding exact

Ancestor Chart

Ancestor chart for GO:0019904
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0019904

Child Term Relationship to
GO:0019904
RS domain binding
is_a
DNA binding domain binding
is_a
MADS box domain binding
is_a
FMN-binding domain binding
is_a
Pyrin domain binding
is_a
HECT domain binding
is_a
death domain binding
is_a
Krueppel-associated box domain binding
is_a
kringle domain binding
is_a
FHA domain binding
is_a

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Binding term considerations Link

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein P21333-1 9606 FLNA_HUMAN GO:0005515 1 NOT-qualified manual annotation exists with evidence code ECO:0000353 from this reference: PMID:30990684
NOT-qualified manual protein P63026 9913 VAMP2_BOVIN GO:0005515 2 NOT-qualified manual annotations exist with evidence code ECO:0000353 from this reference: PMID:20702699
NOT-qualified manual protein Q86V48 9606 LUZP1_HUMAN GO:0005515 1 NOT-qualified manual annotation exists with evidence code ECO:0000353 from this reference: PMID:30990684

Cross-references

Database ID Description
InterPro IPR000296 Cation-dependent mannose-6-phosphate receptor
InterPro IPR010504 Arfaptin homology (AH) domain
InterPro IPR013638 Fork-head N-terminal

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0019904 based on ALL annotations
The top 100 of 5,561 co-occurring terms
Co-occurring Term PR S% #Together #Compared
protein domain specific binding
4,898.33 100.00 39,797 39,797
trans-activation response element binding
4,898.33 22.30 8,875 8,875
symbiont-mediated suppression of host translation initiation
4,461.02 21.82 8,875 9,745
symbiont-mediated perturbation of host chromatin organization
4,392.07 21.74 8,875 9,898
actinin binding
3,220.80 19.98 8,876 13,499
RNA-binding transcription regulator activity
2,512.87 18.40 8,875 17,300
positive regulation of viral transcription
2,400.74 18.10 8,875 18,108
protein serine/threonine phosphatase inhibitor activity
2,044.14 17.01 8,875 21,267
cyclin binding
1,321.75 13.99 8,964 33,220
positive regulation of transcription elongation by RNA polymerase II
1,072.14 12.74 9,296 42,471
Totals 299878 7537827
No co-occurrence statistics for GO:0019904 based on MANUAL annotations
The top 100 of 5,018 co-occurring terms
Co-occurring Term PR S% #Together #Compared
protein domain specific binding
1,147.25 100.00 1,126 1,126
protein-containing complex
73.35 5.24 254 3,973
DNA-binding transcription factor binding
112.62 5.07 107 1,090
enzyme binding
71.03 3.67 93 1,502
establishment of protein localization
176.50 3.22 44 286
protein-containing complex binding
49.82 3.02 102 2,349
cerebral cortex development
122.34 2.99 45 422
astral microtubule organization
458.90 2.89 34 85
glutamatergic synapse
44.26 2.87 114 2,955
positive regulation of gene expression
39.62 2.64 114 3,301
Totals 5706 122005

GO Slims

This term is present in the following GO Consortium-maintained GO slims:

GO slim name Total Number of Terms in Slim
goslim_chembl 296

Change Log

Timestamp Action Category Detail
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with a specific domain of a protein.
2021-05-24 Added DEFINITION Binding to a specific domain of a protein.
2015-05-19 Deleted SUBSET goslim_ChEMBL
2015-05-19 Added SUBSET goslim_chembl
2015-05-11 Added SUBSET goslim_ChEMBL
2009-07-03 Deleted DEFINITION Interacting selectively with a specific domain of a protein.
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with a specific domain of a protein.
2008-05-13 Added DEFINITION Interacting selectively with a specific domain of a protein.
2008-05-12 Deleted DEFINITION Interacting selectively with a specific domain of a protein.
2008-04-01 Updated RELATION is a GO:0005515 (protein binding)
Timestamp Action Category Detail
2003-06-10 Updated TERM protein domain specific binding
2003-03-19 Updated TERM protein domain specific binding activity
2002-01-08 Added TERM protein domain specific binding
Timestamp Action Category Detail
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with a specific domain of a protein.
2021-05-24 Added DEFINITION Binding to a specific domain of a protein.
2009-07-03 Deleted DEFINITION Interacting selectively with a specific domain of a protein.
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with a specific domain of a protein.
2008-05-13 Added DEFINITION Interacting selectively with a specific domain of a protein.
2008-05-12 Deleted DEFINITION Interacting selectively with a specific domain of a protein.
2007-08-09 Deleted SYNONYM protein domain-specific binding
2007-08-09 Added SYNONYM protein domain-specific binding
2005-10-30 Added SYNONYM protein domain-specific binding
2003-05-07 Added DEFINITION Interacting selectively with a specific domain of a protein.
Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0005515 (protein binding)
Timestamp Action Category Detail
Timestamp Action Category Detail
2015-05-19 Deleted SUBSET goslim_ChEMBL
2015-05-19 Added SUBSET goslim_chembl
2015-05-11 Added SUBSET goslim_ChEMBL
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