This term is obsolete.

GO:0046549 JSON

retinal cone cell development

Biological Process

Definition (GO:0046549 GONUTS page)

Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision.

2,140 annotations

Ancestor Chart

Ancestor chart for GO:0046549
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Ancestor chart

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0046549 retinal cone cell development Only in Taxon 7742 Vertebrata

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A8XY28 6238 A8XY28_CAEBR GO:0030154 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein B7PL19 6945 B7PL19_IXOSC GO:0030154 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein B7PVH4 6945 B7PVH4_IXOSC GO:0030154 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein O16262 6239 NIPI4_CAEEL GO:0030154 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein P0CI71 10116 K0319_RAT GO:0022008 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P21275 10090 BMP4_MOUSE GO:0001654 1 NOT-qualified manual annotation exists with evidence code ECO:0000316 from this reference: PMID:16154126
NOT-qualified manual protein P42859 10090 HD_MOUSE GO:0048666 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:10037472
NOT-qualified manual protein P47742 10116 GBRR2_RAT GO:0042462 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P51111 10116 HD_RAT GO:0048666 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P56476 10090 GBRR2_MOUSE GO:0042462 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:12019334

Cross-Ontology Relations

Relation Other Ontology ID Term
results_in_development_of CL CL:0000573 retinal cone cell

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0046549 based on ALL annotations
The top 100 of 494 co-occurring terms
Co-occurring Term PR S% #Together #Compared
retinal cone cell development
94,629.83 100.00 2,094 2,094
auditory receptor cell morphogenesis
73,593.27 44.22 1,060 1,363
stereocilia ankle link complex
19,991.68 17.50 1,058 5,008
inner ear receptor cell stereocilium organization
19,966.73 17.49 1,059 5,019
stereocilium tip
11,562.35 10.91 1,058 8,659
retinal rod cell differentiation
19,029.39 6.51 184 915
photoreceptor inner segment
5,582.89 5.65 1,199 20,323
visual behavior
17,790.41 5.22 141 750
retinal cone cell apoptotic process
64,066.16 5.08 109 161
negative regulation of female receptivity
46,594.38 4.42 97 197
Totals 16531 321659
No co-occurrence statistics for GO:0046549 based on MANUAL annotations
The top 100 of 417 co-occurring terms
Co-occurring Term PR S% #Together #Compared
retinal cone cell development
14,115.33 100.00 100 100
auditory receptor cell morphogenesis
6,929.34 21.09 27 55
stereocilia ankle link complex
3,297.97 13.74 25 107
detection of visible light
8,914.95 11.21 12 19
phosphatidylinositol phosphate 4-phosphatase activity
6,775.36 10.62 12 25
retinal rod cell development
2,926.35 10.30 17 82
phosphatidylinositol phosphate 5-phosphatase activity
4,839.54 9.76 12 35
inner ear receptor cell stereocilium organization
1,781.55 9.29 26 206
stereocilium tip
1,755.64 9.06 25 201
sensory perception of light stimulus
3,321.25 8.63 12 51
Totals 814 12576

Change Log

Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:7742 (Vertebrata)
2008-05-13 Added DEFINITION Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision.
2008-05-12 Deleted DEFINITION Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision.
2008-04-01 Updated RELATION part of GO:0042670 (retinal cone cell differentiation)
2008-04-01 Updated RELATION is a GO:0042462 (eye photoreceptor cell development)
2002-11-27 Added DEFINITION Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision.
2002-10-12 Added TERM retinal cone cell development
Timestamp Action Category Detail
2002-10-12 Added TERM retinal cone cell development
Timestamp Action Category Detail
2008-05-13 Added DEFINITION Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision.
2008-05-12 Deleted DEFINITION Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision.
2002-11-27 Added DEFINITION Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision.
Timestamp Action Category Detail
2008-04-01 Updated RELATION part of GO:0042670 (retinal cone cell differentiation)
2008-04-01 Updated RELATION is a GO:0042462 (eye photoreceptor cell development)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:7742 (Vertebrata)
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