GO:0046549
JSON
retinal cone cell development
Biological Process
Definition (GO:0046549 GONUTS page)
Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision.
Ancestor Chart
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0046549 | retinal cone cell development | Only in Taxon | 7742 | Vertebrata |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A8XY28 | 6238 | A8XY28_CAEBR | GO:0030154 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | B7PL19 | 6945 | B7PL19_IXOSC | GO:0030154 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | B7PVH4 | 6945 | B7PVH4_IXOSC | GO:0030154 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | O16262 | 6239 | NIPI4_CAEEL | GO:0030154 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | P0CI71 | 10116 | K0319_RAT | GO:0022008 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | P21275 | 10090 | BMP4_MOUSE | GO:0001654 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000316 from this reference: PMID:16154126 | |
NOT-qualified manual | protein | P42859 | 10090 | HD_MOUSE | GO:0048666 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:10037472 | |
NOT-qualified manual | protein | P47742 | 10116 | GBRR2_RAT | GO:0042462 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | P51111 | 10116 | HD_RAT | GO:0048666 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | P56476 | 10090 | GBRR2_MOUSE | GO:0042462 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:12019334 |
Cross-Ontology Relations
Relation | Other Ontology | ID | Term |
---|---|---|---|
results_in_development_of | CL | CL:0000573 | retinal cone cell |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0046549 based on ALL annotations
The top 100 of 494 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
retinal cone cell development
|
94,629.83 | 100.00 | 2,094 | 2,094 |
auditory receptor cell morphogenesis
|
73,593.27 | 44.22 | 1,060 | 1,363 |
stereocilia ankle link complex
|
19,991.68 | 17.50 | 1,058 | 5,008 |
inner ear receptor cell stereocilium organization
|
19,966.73 | 17.49 | 1,059 | 5,019 |
stereocilium tip
|
11,562.35 | 10.91 | 1,058 | 8,659 |
retinal rod cell differentiation
|
19,029.39 | 6.51 | 184 | 915 |
photoreceptor inner segment
|
5,582.89 | 5.65 | 1,199 | 20,323 |
visual behavior
|
17,790.41 | 5.22 | 141 | 750 |
retinal cone cell apoptotic process
|
64,066.16 | 5.08 | 109 | 161 |
negative regulation of female receptivity
|
46,594.38 | 4.42 | 97 | 197 |
Totals | 16531 | 321659 |
No co-occurrence statistics for GO:0046549 based on MANUAL annotations
The top 100 of 417 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
retinal cone cell development
|
14,115.33 | 100.00 | 100 | 100 |
auditory receptor cell morphogenesis
|
6,929.34 | 21.09 | 27 | 55 |
stereocilia ankle link complex
|
3,297.97 | 13.74 | 25 | 107 |
detection of visible light
|
8,914.95 | 11.21 | 12 | 19 |
phosphatidylinositol phosphate 4-phosphatase activity
|
6,775.36 | 10.62 | 12 | 25 |
retinal rod cell development
|
2,926.35 | 10.30 | 17 | 82 |
phosphatidylinositol phosphate 5-phosphatase activity
|
4,839.54 | 9.76 | 12 | 35 |
inner ear receptor cell stereocilium organization
|
1,781.55 | 9.29 | 26 | 206 |
stereocilium tip
|
1,755.64 | 9.06 | 25 | 201 |
sensory perception of light stimulus
|
3,321.25 | 8.63 | 12 | 51 |
Totals | 814 | 12576 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
2008-05-13 | Added | DEFINITION | Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision. |
2008-05-12 | Deleted | DEFINITION | Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision. |
2008-04-01 | Updated | RELATION | part of GO:0042670 (retinal cone cell differentiation) |
2008-04-01 | Updated | RELATION | is a GO:0042462 (eye photoreceptor cell development) |
2002-11-27 | Added | DEFINITION | Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision. |
2002-10-12 | Added | TERM | retinal cone cell development |
Timestamp | Action | Category | Detail |
---|---|---|---|
2002-10-12 | Added | TERM | retinal cone cell development |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision. |
2008-05-12 | Deleted | DEFINITION | Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision. |
2002-11-27 | Added | DEFINITION | Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | part of GO:0042670 (retinal cone cell differentiation) |
2008-04-01 | Updated | RELATION | is a GO:0042462 (eye photoreceptor cell development) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
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