Dbfetch
LOCUS XM_006357855 1300 bp mRNA linear PLN 04-APR-2025 DEFINITION PREDICTED: Solanum tuberosum autophagy-related protein 3 (LOC102587849), transcript variant X3, mRNA. ACCESSION XM_006357855 VERSION XM_006357855.2 DBLINK BioProject: PRJNA225997 KEYWORDS RefSeq. SOURCE Solanum tuberosum (potato) ORGANISM Solanum tuberosum Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006239184.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 5, 2016 this sequence version replaced XM_006357855.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_000226075.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/03/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1300 /organism="Solanum tuberosum" /mol_type="mRNA" /cultivar="DM 1-3 516 R44" /db_xref="taxon:4113" /chromosome="Unknown" gene 1..1300 /gene="LOC102587849" /note="autophagy-related protein 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns" /db_xref="GeneID:102587849" CDS 147..1091 /gene="LOC102587849" /codon_start=1 /product="autophagy-related protein 3" /protein_id="XP_006357917.1" /db_xref="GeneID:102587849" /translation="MMVLSQLHGAFKDTVERITSPRTVSAFKEKGVLSVSEFVIAGDN LVSKCPTWSWESGESSKRKSYLPSDKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDN EDNDGWLATHGKPKENNGAEDDNLPSIDASEINKKNTIQSIPSYFGGEEEEDIPDMGE YEEADNLIETDPATLQTTYLVANEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE SRILLQPELVLEDVSQDHARKTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDILMLRG VEPEVDKYLFLFLKFVASVIPTIEYDYTMDFDLGSSST" ORIGIN 1 atagcaataa tcatcccaaa tctagtctag aagaaagaag ctcaacaggt cgtcttttct 61 gttaactccg ggaaagtgta gaaaagacgg aagctgtttg tgtataacgc ttggatcgat 121 catcaaaact gattctccta caatatatga tggtgttgtc acagcttcac ggagcattca 181 aggatacggt ggagagaatc actagccctc gtaccgtctc tgctttcaaa gaaaaaggcg 241 ttctcagcgt cagcgaattc gtcatagctg gcgataatct tgtctccaaa tgccctacct 301 ggtcttggga atcaggtgag tctagtaaga ggaagtctta tttaccatcc gacaagcaat 361 tcttgataac tagaaatgtt ccttgtctga gaagagctgc atcaatagag gaagaatatg 421 aggctgctgg aggtgaagtt cttcttgata atgaggacaa tgatggctgg ctggcaactc 481 atggcaaacc aaaagaaaac aatggtgctg aggatgataa tttgccatct atagacgcat 541 cagaaatcaa caaaaagaac actatccagt caatcccatc atactttgga ggcgaggaag 601 aggaggacat acctgacatg ggagagtatg aggaagctga caatcttata gaaacagacc 661 ctgctaccct tcagactaca tatcttgtgg ccaatgagcc tgatgatgac aacattctaa 721 gaacacgaac ctatgatgtc agcatcacgt atgacaaata ttatcaaaca cctcgtgtgt 781 ggctcactgg atatgatgag tcaaggatac ttttgcagcc agaactcgta cttgaagatg 841 tcagtcaaga ccatgcacgc aagacggtga ccattgaaga ccatccacat cttccaggga 901 aacatgcttc tgtgcatcct tgccgacacg gggctgtgat gaagaaaatt attgatattt 961 tgatgttgag aggagttgaa cccgaagttg acaagtatct tttcctgttc ttgaagtttg 1021 tggcttcggt tattccaacg attgaatatg attacaccat ggactttgat cttggtagca 1081 gtagcacctg atttgcagtc aacttccttc gatgctggca tataacatgt caaccagtca 1141 aatactctaa tgacaatacc tatttataaa ttgtacagtg tttataaacg atcttctaga 1201 aatgtggagc atgcatgatg aattgtcagc atggcttgtt tattttgtat attaacaaag 1261 aattaaggtt attcaagttt gcactttgca cgatccactt //