Job Dispatcher < EMBL-EBI

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Develop

new instruments and methods

Integrating

life science research in Europe

Six sites

represent EMBL in Europe.

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

Job Dispatcher < EMBL-EBI

Explore Sequence Analysis Tools with

Job Dispatcher

EMBL's European Bioinformatics Institute

The Job Dispatcher at EMBL-EBI offers free access to a range of bioinformatics tools and biological datasets through its web and programmatic interfaces. It also powers various popular sequence analysis services hosted at the EMBL-EBI, including InterProScan, UniProt, and Ensembl Genomes.

Retrieve Your Job

Example searches: fasta-R20230421-121005-0548-43453433-p1m

Your Recent Jobs

Job ID	Title	Status	Last update
There is no saved job

Tool Categories

Pairwise Sequence Alignment

Identify regions of similarity between two biological sequences.

Multiple Sequence Alignment

Identify conserved sequence patterns from multiple related sequences.

Sequence Similarity Search

Find sequences in databases based on similarity.

Sequence Translation

Emboss sequence translation and back translation tools.

Transeq | Sixpack | Backtranseq | Backtranambig

Sequence Statistics

Set of tools for performing sequence statistics.

Phylogeny

Phylogenetic tree generation using the ClustalW2 program.

Simple Phylogeny

Protein Functional Analysis

Assign biological or biochemical roles to proteins.

InterProScan | PfamScan | HMMER3 hmmscan | More...

Sequence Operations

Generate checksums for protein and nucleotide sequences.

SeqCksum

RNA Analysis

Set of tools for performing various RNA analysis.

Infernal cmscan | R2DT

Sequence Format Conversion

Read different biological sequence formats and convert them to other formats.

Seqret | MView

Dbfetch

Single point of access to retrieve entries from various EMBL-EBI databases.

EMBOSS Tools

Set of selected EMBOSS tools for sequence analysis.

Cons | Needle | Stretcher | More...

ReleasesDataset updates for March 2025

The latest dataset releases are available for sequence searching in our Sequence Similarity Search bioinformatics applications and Dbfetch.

NewsUpcoming virtual course about Protein characterisation using EMBL-EBI APIs

Join our virtual workshop on 5th June 2025 to learn how to access various protein resources and sequence analysis tools using APIs!

Major Collaborators

We work with several service teams within and outside the EBI, some of which are listed here. Our collaborations with data resource teams provide sequence similarity searches against various core databases such as UniProt, PDBe, ENA, etc.

How to cite

To cite Job Dispatcher, please refer to the following publication:

Madeira F, Madhusoodanan N, Lee J, Eusebi A, Niewielska A, Tivey ARN, Lopez R, Butcher S. (2024)
The EMBL-EBI Job Dispatcher sequence analysis tools framework in 2024
Nucleic Acids Research, April 10, 2024; doi: 10.1093/nar/gkae241
Europe PMC: 38597606

Version: 2.3.0+fbf3fc83

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