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A
(82)
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Acaryochloris
Accumulibacter
Acetobacter
Acetobacterium
Acetohalobium
Acholeplasma
Achromobacter
Acidaminococcus
Acidianus
Acidilobus
Acidimicrobium
Acidiphilium
Acidithiobacillus
Acidobacterium
Acidothermus
Acidovorax
Aciduliprofundum
Acinetobacter
Actinobacillus
Actinoplanes
Actinosynnema
Acyrthosiphon
Advenella
Aedes
Aequorivita
Aerococcus
Aeromonas
Aeropyrum
Aggregatibacter
Agrobacterium
Ailuropoda
Ajellomyces
Akkermansia
Alcanivorax
Alicycliphilus
Alicyclobacillus
Aliivibrio
Alistipes
Alkalilimnicola
Alkaliphilus
Allochromatium
Alphaproteobacteria
Alteromonas
Aminobacterium
Ammonifex
Amoebophilus
Amphibacillus
Amphimedon
Amycolatopsis
Amycolicicoccus
Anabaena
Anaerobaculum
Anaerocellum
Anaerococcus
Anaerolinea
Anaeromyxobacter
Anaplasma
Anolis
Anopheles
Anoxybacillus
Apis
Apple
Aquifex
Arabidopsis
Arcanobacterium
Archaeoglobus
Arcobacter
Aromatoleum
Arthrobacter
Arthroderma
Arthromitus
Arthrospira
Ashbya
Aspergillus
Aster
Asticcacaulis
Atopobium
Azoarcus
Azobacteroides
Azorhizobium
Azospirillum
Azotobacter
B
(33)
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Babesia
Bacillus
Bacteriovorax
Bacteroides
Bartonella
Baumannia
Bdellovibrio
Beijerinckia
Belliella
Betaproteobacteria
Beutenbergia
Bibersteinia
Bifidobacterium
Blastococcus
Blattabacterium
Blochmannia
Bombyx
Bordetella
Borrelia
Bos
Botryotinia
Brachybacterium
Brachypodium
Brachyspira
Bradyrhizobium
Branchiostoma
Brevibacillus
Brevundimonas
Brucella
Brugia
Buchnera
Burkholderia
Butyrivibrio
C
(72)
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Caenorhabditis
Caldicellulosiruptor
Caldilinea
Caldisericum
Caldisphaera
Calditerrivibrio
Caldivirga
Calothrix
Campylobacter
Candida
Candidatus
Canis
Capnocytophaga
Carboxydothermus
Cardinium
Carnobacterium
Carsonella
Catenulispora
Caulobacter
Cellulomonas
Cellulophaga
Cellulosilyticum
Cellvibrio
Cenarchaeum
Chamaesiphon
Chitinophaga
Chlamydia
Chlamydomonas
Chlamydophila
Chloracidobacterium
Chlorobaculum
Chlorobium
Chloroflexus
Chloroherpeton
Chromobacterium
Chromohalobacter
Chroococcidiopsis
Ciona
Citrobacter
Clavibacter
Clavispora
Clostridiales
Clostridium
Coccidioides
Collimonas
Colwellia
Comamonas
Conexibacter
Coprinopsis
Coprococcus
Coprothermobacter
Coraliomargarita
Corallococcus
Coriobacterium
Corynebacterium
Coxiella
Crinalium
Croceibacter
Cronobacter
Cryptobacterium
Cryptococcus
Cryptosporidium
Cucumis
Culex
Cupriavidus
Cyanidioschyzon
Cyanobium
Cyanothece
Cyclobacterium
Cycloclasticus
Cylindrospermum
Cytophaga
D
(41)
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Dactylococcopsis
Danio
Daphnia
Debaryomyces
Dechloromonas
Dechlorosoma
Deferribacter
Dehalobacter
Dehalococcoides
Dehalogenimonas
Deinococcus
Delftia
Denitrovibrio
Desulfarculus
Desulfatibacillum
Desulfitobacterium
Desulfobacca
Desulfobacterium
Desulfobacula
Desulfobulbus
Desulfocapsa
Desulfococcus
Desulfohalobium
Desulfomicrobium
Desulfomonile
Desulforudis
Desulfosporosinus
Desulfotalea
Desulfotomaculum
Desulfovibrio
Desulfurispirillum
Desulfurivibrio
Desulfurobacterium
Desulfurococcus
Dichelobacter
Dickeya
Dictyoglomus
Dictyostelium
Dinoroseobacter
Drosophila
Dyadobacter
E
(21)
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Echinicola
Edwardsiella
Eggerthella
Ehrlichia
Elusimicrobium
Emericella
Emticicia
Encephalitozoon
Entamoeba
Enterobacter
Enterobacteriaceae
Enterococcus
Equus
Eremothecium
Erwinia
Erysipelothrix
Erythrobacter
Escherichia
Ethanoligenens
Eubacterium
Exiguobacterium
F
(19)
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Faecalibacterium
Felis
Ferrimonas
Ferroglobus
Fervidicoccus
Fervidobacterium
Fibrella
Fibrobacter
Filifactor
Finegoldia
Flavobacteriaceae
Flavobacterium
Flexibacter
Flexistipes
Fluviicola
Francisella
Frankia
Frateuria
Fusobacterium
G
(24)
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Gallibacterium
Gallionella
Gallus
Gammaproteobacteria
Gardnerella
Geitlerinema
Gemmatimonas
Geobacillus
Geobacter
Geodermatophilus
Giardia
Gibberella
Glaciecola
Gloeobacter
Gloeocapsa
Gluconacetobacter
Gluconobacter
Glycine
Gordonia
Gordonibacter
Gorilla
Gramella
Granulibacter
Granulicella
H
(41)
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Haemophilus
Hahella
Halalkalicoccus
Halanaerobium
Haliangium
Haliscomenobacter
Haloarcula
Halobacillus
Halobacteria
Halobacterium
Halobacteroides
Haloferax
Halogeometricum
Halomicrobium
Halomonas
Halopiger
Haloquadratum
Halorhabdus
Halorhodospira
Halorubrum
Haloterrigena
Halothece
Halothermothrix
Halothiobacillus
Halovivax
Hamiltonella
Helicobacter
Heliobacterium
Herbaspirillum
Herminiimonas
Herpetosiphon
Hippea
Hirschia
Hodgkinia
Homo
Hydra
Hydrogenobacter
Hydrogenobaculum
Hyperthermus
Hyphomicrobium
Hyphomonas
I
(10)
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Idiomarina
Ignavibacterium
Ignicoccus
Ignisphaera
Ilumatobacter
Ilyobacter
Intrasporangium
Isoptericola
Isosphaera
Ixodes
J
(3)
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Jannaschia
Janthinobacterium
Jonesia
K
(14)
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Kangiella
Kazachstania
Ketogulonicigenium
Kineococcus
Kitasatospora
Klebsiella
Kluyveromyces
Kocuria
Korarchaeum
Koribacter
Kosmotoga
Kribbella
Krokinobacter
Kytococcus
L
(22)
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Laccaria
Lachancea
Lacinutrix
Lactobacillus
Lactococcus
Laribacter
Lawsonia
Leadbetterella
Legionella
Leifsonia
Leishmania
Leptolyngbya
Leptospira
Leptospirillum
Leptothrix
Leptotrichia
Leuconostoc
Liberibacter
Listeria
Lodderomyces
Lotus
Lysinibacillus
M
(86)
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Macaca
Macrococcus
Magnaporthe
Magnetococcus
Magnetospirillum
Mahella
Malassezia
Mannheimia
Maribacter
Maricaulis
Marinithermus
Marinitoga
Marinobacter
Marinomonas
Marivirga
Medicago
Megamonas
Megasphaera
Meiothermus
Meleagris
Melissococcus
Mesoplasma
Mesorhizobium
Mesotoga
Metallosphaera
Methanobacterium
Methanobrevibacter
Methanocaldococcus
Methanocella
Methanococcoides
Methanococcus
Methanocorpusculum
Methanoculleus
Methanohalobium
Methanohalophilus
Methanolobus
Methanomethylovorans
Methanoplanus
Methanopyrus
Methanoregula
Methanosaeta
Methanosalsum
Methanosarcina
Methanosphaera
Methanosphaerula
Methanospirillum
Methanothermobacter
Methanothermococcus
Methanothermus
Methanotorris
Methylacidiphilum
Methylibium
Methylobacillus
Methylobacterium
Methylocella
Methylococcus
Methylocystis
Methylomicrobium
Methylomonas
Methylophaga
Methylotenera
Methylovorus
Meyerozyma
Micavibrio
Microbacterium
Micrococcus
Microcoleus
Microcystis
Microlunatus
Micromonospora
Midichloria
Mobiluncus
Modestobacter
Moniliophthora
Monodelphis
Monosiga
Moorella
Moranella
Moraxella
Morganella
Muricauda
Mus
Mycobacterium
Mycoplasma
Mycosphaerella
Myxococcus
N
(34)
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Naegleria
Nakamurella
Nanoarchaeum
Nasonia
Natranaerobius
Natrialba
Natrinema
Natronobacterium
Natronococcus
Natronomonas
Naumovozyma
Nautilia
Nectria
Neisseria
Nematostella
Neorickettsia
Neosartorya
Neurospora
Niastella
Nitratifractor
Nitratiruptor
Nitrobacter
Nitrosococcus
Nitrosomonas
Nitrosopumilus
Nitrososphaera
Nitrosospira
Nocardia
Nocardioides
Nocardiopsis
Nonlabens
Nosema
Nostoc
Novosphingobium
O
(20)
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Oceanimonas
Oceanithermus
Oceanobacillus
Ochrobactrum
Octadecabacter
Odoribacter
Oenococcus
Oligotropha
Olsenella
Onion
Opitutus
Orientia
Ornithobacterium
Ornithorhynchus
Oryza
Oryzias
Oscillatoria
Oscillibacter
Ostreococcus
Owenweeksia
P
(74)
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Paenibacillus
Paludibacter
Pan
Pantoea
Parabacteroides
Parachlamydia
Paracoccidioides
Paracoccus
Paramecium
Parvibaculum
Parvularcula
Pasteurella
Pectobacterium
Pediculus
Pediococcus
Pedobacter
Pelagibacter
Pelagibacterium
Pelobacter
Pelodictyon
Pelotomaculum
Penicillium
Persephonella
Petrotoga
Phaeobacter
Phaeodactylum
Phaeosphaeria
Phanerochaete
Phenylobacterium
Photobacterium
Photorhabdus
Phycisphaera
Physcomitrella
Phytophthora
Phytoplasma
Pichia
Picrophilus
Pirellula
Planctomyces
Plasmodium
Pleurocapsa
Podospora
Polaribacter
Polaromonas
Polymorphum
Polynucleobacter
Pongo
Populus
Porphyromonas
Postia
Prevotella
Prochlorococcus
Propionibacterium
Prosthecochloris
Proteus
Protochlamydia
Providencia
Pseudanabaena
Pseudoalteromonas
Pseudogulbenkiania
Pseudomonas
Pseudonocardia
Pseudovibrio
Pseudoxanthomonas
Psychrobacter
Psychroflexus
Psychromonas
Puccinia
Puniceispirillum
Pusillimonas
Pyrenophora
Pyrobaculum
Pyrococcus
Pyrolobus
R
(31)
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Rahnella
Ralstonia
Ramlibacter
Raoultella
Rattus
Renibacterium
Rhizobium
Rhodanobacter
Rhodobacter
Rhodococcus
Rhodoferax
Rhodomicrobium
Rhodopirellula
Rhodopseudomonas
Rhodospirillum
Rhodothermus
Ricinus
Rickettsia
Riemerella
Riesia
Rivularia
Robiginitalea
Roseburia
Roseiflexus
Roseobacter
Rothia
Rubrivivax
Rubrobacter
Ruminococcus
Runella
Ruthia
S
(76)
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Saccharomonospora
Saccharomyces
Saccharophagus
Saccharopolyspora
Saccharothrix
Salinibacter
Salinispora
Salmonella
Sanguibacter
Saprospira
Sarcophilus
Scheffersomyces
Schistosoma
Schizophyllum
Schizosaccharomyces
Sclerotinia
Sebaldella
Segniliparus
Selaginella
Selenomonas
Serratia
Shewanella
Shigella
Shimwellia
Sideroxydans
Silicibacter
Simiduia
Simkania
Singulisphaera
Sinorhizobium
Slackia
Sodalis
Solibacillus
Solibacter
Solitalea
Sorangium
Sordaria
Sorghum
Sphaerobacter
Sphaerochaeta
Sphingobacterium
Sphingobium
Sphingomonas
Sphingopyxis
Spirochaeta
Spirosoma
Stackebrandtia
Stanieria
Staphylococcus
Staphylothermus
Starkeya
Stenotrophomonas
Stigmatella
Streptobacillus
Streptococcus
Streptomyces
Streptosporangium
Strongylocentrotus
Sulcia
Sulfobacillus
Sulfolobus
Sulfuricurvum
Sulfurihydrogenibium
Sulfurimonas
Sulfurospirillum
Sulfurovum
Sus
Symbiobacterium
Synechococcus
Synechocystis
Synergistetes
Syntrophobacter
Syntrophobotulus
Syntrophomonas
Syntrophothermus
Syntrophus
T
(72)
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Taeniopygia
Takifugu
Tannerella
Taylorella
Tepidanaerobacter
Teredinibacter
Terriglobus
Tetragenococcus
Tetrahymena
Tetraodon
Tetrapisispora
Thalassiosira
Thalassolituus
Thauera
Theileria
Thermacetogenium
Thermaerobacter
Thermanaerovibrio
Thermincola
Thermoanaerobacter
Thermoanaerobacterium
Thermobacillus
Thermobaculum
Thermobifida
Thermobispora
Thermococcus
Thermocrinis
Thermodesulfatator
Thermodesulfobacterium
Thermodesulfobium
Thermodesulfovibrio
Thermofilum
Thermogladius
Thermomicrobium
Thermomonospora
Thermoplasma
Thermoplasmatales
Thermoproteus
Thermosediminibacter
Thermosipho
Thermosphaera
Thermosynechococcus
Thermotoga
Thermovibrio
Thermovirga
Thermus
Thielavia
Thioalkalimicrobium
Thioalkalivibrio
Thiobacillus
Thiocystis
Thioflavicoccus
Thiomicrospira
Thiomonas
Tistrella
Tolumonas
Torulaspora
Toxoplasma
Tremblaya
Treponema
Tribolium
Trichinella
Trichodesmium
Trichomonas
Trichophyton
Trichoplax
Tropheryma
Truepera
Trypanosoma
Tsukamurella
Tuber
Turneriella
U
(4)
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Uncinocarpus
Uncultured
Ureaplasma
Ustilago
V
(11)
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Vanderwaltozyma
Variovorax
Veillonella
Verminephrobacter
Verrucosispora
Verticillium
Vesicomyosocius
Vibrio
Vitis
Volvox
Vulcanisaeta
W
(6)
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Waddlia
Weeksella
Weissella
Wigglesworthia
Wolbachia
Wolinella
X
(6)
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Xanthobacter
Xanthomonas
Xenopus
Xenorhabdus
Xylanimonas
Xylella
Y
(2)
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Yarrowia
Yersinia
Z
(6)
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Zea
Zinderia
Zobellia
Zunongwangia
Zygosaccharomyces
Zymomonas
[
(1)
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[Eubacterium]
a
(1)
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aphid secondary symbionts
b
(1)
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butyrate-producing
c
(1)
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cyanobacterium
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