TMP (CHEBI:45394)

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CHEBI:45394 - TMP

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ChEBI Name	TMP

ChEBI ID	CHEBI:45394

Definition	A pyrimidine ribonucleoside 5'-monophosphate in which the pyrimidine element is 5-methyluracil. Derived from breakdown of an RNA molecule, typically a tRNA modified at position 54 (U to T).

Stars	This entity has been manually annotated by the ChEBI Team.

Submitter	Harold Drabkin

Secondary ChEBI IDs	CHEBI:40207, CHEBI:45390, CHEBI:77120

Supplier Information	No supplier information found for this compound.

Download	Molfile XML SDF

more structures >>

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The Resolver thinks Mol

Marvin 09130717113D

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Time for openFile(

Marvin 09130717113D

37 38 0 0 0 0 999 V2000

-0.1200 -0.2740 2.2260 N 0 0 0 0 0 0 0 0 0 0 0 0

0.5120 0.9120 2.2450 C 0 0 0 0 0 0 0 0 0 0 0 0

1.2950 1.2610 3.2820 N 0 0 0 0 0 0 0 0 0 0 0 0

1.4530 0.4240 4.3270 C 0 0 0 0 0 0 0 0 0 0 0 0

0.7960 -0.8290 4.3170 C 0 0 0 0 0 0 0 0 0 0 0 0

0.9590 -1.7860 5.4700 C 0 0 0 0 0 0 0 0 0 0 0 0

0.0160 -1.1550 3.2640 C 0 0 0 0 0 0 0 0 0 0 0 0

0.3750 1.6790 1.3120 O 0 0 0 0 0 0 0 0 0 0 0 0

2.1610 0.7390 5.2660 O 0 0 0 0 0 0 0 0 0 0 0 0

-0.9660 -0.6270 1.0830 C 0 0 1 0 0 0 0 0 0 0 0 0

-2.0880 0.4190 0.9000 C 0 0 2 0 0 0 0 0 0 0 0 0

-3.3100 -0.0400 1.4820 O 0 0 0 0 0 0 0 0 0 0 0 0

-2.2330 0.5470 -0.6330 C 0 0 1 0 0 0 0 0 0 0 0 0

-1.1840 -0.4380 -1.1940 C 0 0 2 0 0 0 0 0 0 0 0 0

-3.5470 0.1690 -1.0460 O 0 0 0 0 0 0 0 0 0 0 0 0

-0.2040 -0.5720 -0.1420 O 0 0 0 0 0 0 0 0 0 0 0 0

-0.5360 0.1310 -2.4570 C 0 0 0 0 0 0 0 0 0 0 0 0

0.4790 -0.7630 -2.9160 O 0 0 0 0 0 0 0 0 0 0 0 0

1.1150 -0.1040 -4.2400 P 0 0 1 0 0 0 0 0 0 0 0 0

1.6920 1.2170 -3.9060 O 0 0 0 0 0 0 0 0 0 0 0 0

2.2730 -1.0650 -4.8140 O 0 0 0 0 0 0 0 0 0 0 0 0

-0.0320 0.0770 -5.3540 O 0 0 0 0 0 0 0 0 0 0 0 0

1.7450 2.1210 3.2800 H 0 0 0 0 0 0 0 0 0 0 0 0

-0.4950 -2.1050 3.2410 H 0 0 0 0 0 0 0 0 0 0 0 0

1.6220 -1.3460 6.2160 H 0 0 0 0 0 0 0 0 0 0 0 0

-0.0130 -1.9830 5.9200 H 0 0 0 0 0 0 0 0 0 0 0 0

1.3890 -2.7200 5.1090 H 0 0 0 0 0 0 0 0 0 0 0 0

-1.3930 -1.6210 1.2200 H 0 0 0 0 0 0 0 0 0 0 0 0

-1.7930 1.3720 1.3380 H 0 0 0 0 0 0 0 0 0 0 0 0

-3.9820 0.6250 1.2820 H 0 0 0 0 0 0 0 0 0 0 0 0

-2.0110 1.5650 -0.9550 H 0 0 0 0 0 0 0 0 0 0 0 0

-1.6460 -1.4020 -1.4070 H 0 0 0 0 0 0 0 0 0 0 0 0

-4.1570 0.8180 -0.6680 H 0 0 0 0 0 0 0 0 0 0 0 0

-1.2930 0.2500 -3.2320 H 0 0 0 0 0 0 0 0 0 0 0 0

-0.0910 1.1000 -2.2320 H 0 0 0 0 0 0 0 0 0 0 0 0

2.6270 -0.6340 -5.6040 H 0 0 0 0 0 0 0 0 0 0 0 0

-0.3800 -0.8040 -5.5430 H 0 0 0 0 0 0 0 0 0 0 0 0

1 2 1 0 0 0 0

1 7 1 0 0 0 0

1 10 1 0 0 0 0

2 3 1 0 0 0 0

2 8 2 0 0 0 0

3 4 1 0 0 0 0

3 23 1 0 0 0 0

4 5 1 0 0 0 0

4 9 2 0 0 0 0

5 6 1 0 0 0 0

5 7 2 0 0 0 0

6 25 1 0 0 0 0

6 26 1 0 0 0 0

6 27 1 0 0 0 0

7 24 1 0 0 0 0

10 11 1 0 0 0 0

10 16 1 0 0 0 0

10 28 1 0 0 0 0

11 12 1 0 0 0 0

11 13 1 0 0 0 0

11 29 1 0 0 0 0

12 30 1 0 0 0 0

13 14 1 0 0 0 0

13 15 1 0 0 0 0

13 31 1 0 0 0 0

14 16 1 0 0 0 0

14 17 1 0 0 0 0

14 32 1 0 0 0 0

15 33 1 0 0 0 0

17 18 1 0 0 0 0

17 34 1 0 0 0 0

17 35 1 0 0 0 0

18 19 1 0 0 0 0

19 20 2 0 0 0 0

19 21 1 0 0 0 0

19 22 1 0 0 0 0

21 36 1 0 0 0 0

22 37 1 0 0 0 0

M END): 18 ms

reading 37 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Babel

37 atoms created

ModelSet: not autobonding; use forceAutobond=true to force automatic bond creation

Script completed

Jmol script terminated

Molfile expand

Molfile

Formula

C10H15N2O9P

Net Charge

Average Mass

338.209

Monoisotopic Mass

338.05152

InChI

InChI=1S/C10H15N2O9P/c1-4-2-12(10(16)11-8(4)15)9-7(14)6(13)5(21-9)3-20-22(17,18)19/h2,5-7,9,13-14H,3H2,1H3,(H,11,15,16)(H2,17,18,19)/t5-,6-,7-,9-/m1/s1

InChIKey

IGWHDMPTQKSDTL-JXOAFFINSA-N

SMILES

[C@@H]1(N2C(NC(=O)C(=C2)C)=O)O[C@H](COP(O)(=O)O)[C@H]([C@H]1O)O

ChEBI Ontology
Outgoing	TMP (CHEBI:45394) has functional parent ribothymidine (CHEBI:45996) TMP (CHEBI:45394) is a pyrimidine ribonucleoside 5'-monophosphate (CHEBI:39457) TMP (CHEBI:45394) is conjugate acid of TMP(2−) (CHEBI:142797)

Incoming	rRNA containing C⁵-methyluridine (CHEBI:149725) has functional parent TMP (CHEBI:45394) TMP(2−) (CHEBI:142797) is conjugate base of TMP (CHEBI:45394)

IUPAC Name

5-methyluridine 5'-(dihydrogen phosphate)

Synonyms	Sources
5-methyl-5'-uridylic acid	ChEBI
5-methyluridine 5'-(dihydrogen phosphate)	PDBeChem
5-Methyluridine 5'-Monophosphate	DrugBank
5-methyluridine 5'-phosphate	ChEBI
5-Methyluridine monophosphate	SUBMITTER
5mUMP	SUBMITTER
ribo-TMP	ChEBI
ribosylthymidine 5'-monophosphate	ChEBI
ribosylthymidine 5'-phosphate	ChEBI
ribosylthymine 5'-monophosphate	ChEBI
ribosylthymine 5'-phosphate	ChEBI
ribothymidine 5'-monophosphate	ChEBI
ribothymidine 5'-phosphate	ChEBI
rTMP	SUBMITTER

Manual Xrefs	Databases
5MU	PDBeChem
DB04243	DrugBank
View more database links

Registry Numbers	Types	Sources
3590-47-4	CAS Registry Number	ChEBI
766231	Reaxys Registry Number	Reaxys

Citation

Antle VD, Caperelli CA (1999)
Synthesis of chiral carbocyclic ribonucleotides.
Nucleosides & nucleotides 18, 1911-1928 [PubMed:10549145]
[show Abstract]

Last Modified

11 June 2020

CHEBI:45394 - TMP

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