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Collaborations

RNAcentral

A comprehensive ncRNA sequence collection representing all ncRNA types from a broad range of organisms.

InterPro

InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites.

dbfetch/WSDbfetch

Dbfetch provides an easy way to retrieve entries from various databases at the EMBL-EBI in a consistent manner.

MetaboLights

A database for Metabolomics experiments and derived information.

Expression Atlas

An open science resource that gives users a powerful way to find information about gene and protein expression.

Job Dispatcher

An analysis tool framework for job submission/dispatching and result retrieval/presentation.

LRG

A Locus Reference Genomic (LRG) record is manually curated and contains stable genomic, transcript and protein reference sequences for reporting clinically relevant sequence variants.

EMBOSS

The European Molecular Biology Open Software Suite (EMBOSS) is a package of open source software tools for molecular biology.

MGnify

MGnify offers an automated pipeline for the analysis and archiving of microbiome data.

BioModels

A repository of mathematical models of biological and biomedical systems.

Rfam

A collection of RNA families, each represented by multiple sequence alignments, consensus secondary structures and covariance models.

COVID-19 Data Portal

The COVID-19 Data Portal enables researchers to upload, access and analyse COVID-19 related reference data and specialist datasets.

PDBe

PDBe is a founding member of the Worldwide Protein Data Bank (wwPDB) which collects, organises and disseminates data on biological macromolecular structures.


How to cite

To cite EBI Search, please refer to the following publication:

Madeira F., Pearce M., Tivey ARN., Basutkar P., Lee J., Edbali O., Madhusoodanan N., Kolesnikov A., Lopez R. (2022)
Search and sequence analysis tools services from EMBL-EBI in 2022
Nucleic Acids Research, April 12, 2022; doi: 10.1093/nar/gkac240

PubMed: 35412617

If you use EBI Search APIs in your projects, please add 'Powered by EBI Search' in your search pages or any other appropriate places.

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