› 1d13

X-ray diffraction
2Å resolution

MOLECULAR STRUCTURE OF AN A-DNA DECAMER D(ACCGGCCGGT)

Released:
DOI: 10.2210/pdb1d13/pdb
PDB entry 1d13 coloured by chain, front view.
PDB entry 1d13 coloured by chain, side view.
PDB entry 1d13 coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Molecular structure of an A-DNA decamer d(ACCGGCCGGT).
Frederick CA, Quigley GJ, Teng MK, Coll M, Van der Marel GA, Van Boom JH, Rich A, Wang AH
Eur J Biochem 181 295-307 (1989)
PMID: 2714286

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113573 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3') Chain: A
Molecule details ›
Chain: A
Length: 10 nucleotides
Theoretical weight: 3.05 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P6122
Unit cell:
a: 39.23Å b: 39.23Å c: 78.01Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.18 not available not available
Expression system: Not provided

Quick links

Citations

1 review citation

Oligonucleotide structure: a decade of results from single crystal X-ray diffraction studies.
Kennard et al. (1989)
29 other articles

4 mentions without citation

Conformational analysis of nucleic acids revisited: Curves+.
Lavery et al. (2009)
3 more