1gl4

X-ray diffraction
2Å resolution

Nidogen-1 G2/Perlecan IG3 Complex

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-145322 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Nidogen-1 Chain: A
Molecule details ›
Chain: A
Length: 285 amino acids
Theoretical weight: 31.35 KDa
Source organism: Mus musculus
Expression system: Homo sapiens
UniProt:
  • Canonical: P10493 (Residues: 384-665; Coverage: 23%)
Gene names: Ent, Nid1
Sequence domains: G2F domain
Structure domains: Green fluorescent protein
Basement membrane-specific heparan sulfate proteoglycan core protein Chain: B
Molecule details ›
Chain: B
Length: 98 amino acids
Theoretical weight: 10.56 KDa
Source organism: Mus musculus
Expression system: Homo sapiens
UniProt:
  • Canonical: Q05793 (Residues: 1765-1858; Coverage: 3%)
Gene name: Hspg2
Sequence domains: Immunoglobulin domain
Structure domains: Immunoglobulins

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SRS BEAMLINE PX9.6
Spacegroup: P212121
Unit cell:
a: 55.92Å b: 72.3Å c: 103.93Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.217 0.217 0.247
Expression system: Homo sapiens