› 1hx6

X-ray diffraction
1.65Å resolution

P3, THE MAJOR COAT PROTEIN OF THE LIPID-CONTAINING BACTERIOPHAGE PRD1.

Released:
DOI: 10.2210/pdb1hx6/pdb
PDB entry 1hx6 coloured by chain, front view.
PDB entry 1hx6 coloured by chain, side view.
PDB entry 1hx6 coloured by chain, top view.
Source organism: Enterobacteria phage PRD1
Primary publication:
The X-ray crystal structure of P3, the major coat protein of the lipid-containing bacteriophage PRD1, at 1.65 A resolution.
Benson SD, Bamford JK, Bamford DH, Burnett RM
Acta Crystallogr D Biol Crystallogr 58 39-59 (2002)
PMID: 11752778

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-149665 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Major capsid protein P3 Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 394 amino acids
Theoretical weight: 43.35 KDa
Source organism: Enterobacteria phage PRD1
Expression system: Salmonella enterica subsp. enterica serovar Typhimurium
UniProt:
  • Canonical: P22535 (Residues: 2-395; Coverage: 100%)
Gene name: III
Sequence domains: P3 major capsid protein
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand CL 2 x CL
Ligand NA 7 x NA
Ligand MPD 18 x MPD
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X12C
Spacegroup: P212121
Unit cell:
a: 117.96Å b: 121.3Å c: 126.39Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.19 0.19 0.208
Expression system: Salmonella enterica subsp. enterica serovar Typhimurium

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Citations

3 review citations

Adenovirus structure.
Rux et al. (2004)
2 more

8 mentions without citation

The Baltimore Classification of Viruses 50 Years Later: How Does It Stand in the Light of Virus Evolution?
Koonin et al. (2021)
7 more