› 1ie1

Solution NMR

NMR Solution Structure of an In Vitro Selected RNA which is Sequence Specifically Recognized by Hamster Nucleolin RBD12.

Released:
DOI: 10.2210/pdb1ie1/pdb
PDB entry 1ie1 coloured by chain, ensemble of 18 models, front view.
PDB entry 1ie1 coloured by chain, ensemble of 18 models, side view.
PDB entry 1ie1 coloured by chain, ensemble of 18 models, top view.
Source organism: Synthetic construct
Primary publication:
Recognition of pre-formed and flexible elements of an RNA stem-loop by nucleolin.
Bouvet P, Allain FH, Finger LD, Dieckmann T, Feigon J
J Mol Biol 309 763-75 (2001)
PMID: 11397095

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196055 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
5'-R(*GP*GP*CP*CP*GP*AP*AP*AP*UP*CP*CP*CP*GP*AP*AP*GP*UP*AP*GP*GP*CP*C)-3' Chain: A
Molecule details ›
Chain: A
Length: 22 nucleotides
Theoretical weight: 7.1 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: Simulated annealing starting from randomized templates. Base planarity restraints were added.
Expression system: Not provided

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Citations

7 review citations

Coupling of folding and binding for unstructured proteins.
Dyson et al. (2002)
6 more