1jk9

X-ray diffraction
2.9Å resolution

Heterodimer between H48F-ySOD1 and yCCS

Released:

Function and Biology Details

Structure analysis Details

Assemblies composition:
hetero dimer (preferred)
hetero tetramer
PDBe Complex ID:
PDB-CPX-132503 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Superoxide dismutase [Cu-Zn] Chains: A, C
Molecule details ›
Chains: A, C
Length: 153 amino acids
Theoretical weight: 15.75 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P00445 (Residues: 2-154; Coverage: 99%)
Gene names: J1968, SOD1, YJR104C
Sequence domains: Copper/zinc superoxide dismutase (SODC)
Structure domains: Superoxide dismutase, copper/zinc binding domain
Superoxide dismutase 1 copper chaperone Chains: B, D
Molecule details ›
Chains: B, D
Length: 249 amino acids
Theoretical weight: 27.36 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P40202 (Residues: 1-249; Coverage: 100%)
Gene names: CCS1, LYS7, YM9532.03C, YMR038C
Sequence domains: Heavy-metal-associated domain
Structure domains:

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 5ID-B
Spacegroup: P3221
Unit cell:
a: 104.09Å b: 104.09Å c: 233.71Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.217 0.217 0.26
Expression system: Escherichia coli BL21(DE3)