1oak

X-ray diffraction
2.2Å resolution

CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR (VWF) A1 DOMAIN IN COMPLEX WITH THE FUNCTION BLOCKING NMC-4 FAB

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-208665 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
NMC-4 IGG1 Chain: L
Molecule details ›
Chain: L
Length: 212 amino acids
Theoretical weight: 23.46 KDa
Source organism: Mus musculus
Expression system: Mus musculus
Structure domains: Immunoglobulins
Ig gamma-1 chain C region secreted form Chain: H
Molecule details ›
Chain: H
Length: 223 amino acids
Theoretical weight: 23.89 KDa
Source organism: Mus musculus
Expression system: Mus musculus
UniProt:
  • Canonical: P01868 (Residues: 1-101; Coverage: 31%)
Gene names: Igh-4, Ighg1
Sequence domains: Immunoglobulin C1-set domain
Structure domains: Immunoglobulins
von Willebrand factor Chain: A
Molecule details ›
Chain: A
Length: 196 amino acids
Theoretical weight: 22.44 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P04275 (Residues: 1270-1465; Coverage: 7%)
Gene names: F8VWF, VWF
Sequence domains: von Willebrand factor type A domain
Structure domains: von Willebrand factor, type A domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL7-1
Spacegroup: C2
Unit cell:
a: 208.2Å b: 61.9Å c: 72.9Å
α: 90° β: 108.6° γ: 90°
R-values:
R R work R free
0.201 0.201 0.274
Expression systems:
  • Mus musculus
  • Escherichia coli