› 1qdk

Solution NMR

THE NMR STUDY OF DNA QUADRUPLEX STRUCTURE, (12MER) DNA

Released:
DOI: 10.2210/pdb1qdk/pdb
PDB entry 1qdk coloured by chain, front view.
PDB entry 1qdk coloured by chain, side view.
PDB entry 1qdk coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Determination of the number and location of the manganese binding sites of DNA quadruplexes in solution by EPR and NMR in the presence and absence of thrombin.
Marathias VM, Wang KY, Kumar S, Pham TQ, Swaminathan S, Bolton PH
J Mol Biol 260 378-94 (1996)
PMID: 8757801

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-114435 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3') Chains: A, B
Molecule details ›
Chains: A, B
Length: 12 nucleotides
Theoretical weight: 3.81 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand MN 2 x MN
No modified residues

Experiments and Validation Details

Entry percentile scores
Expression system: Not provided

Quick links

Citations

5 review citations

Metal Cations in G-Quadruplex Folding and Stability.
Bhattacharyya et al. (2016)
4 more