› 1ycc

X-ray diffraction
1.23Å resolution

HIGH-RESOLUTION REFINEMENT OF YEAST ISO-1-CYTOCHROME C AND COMPARISONS WITH OTHER EUKARYOTIC CYTOCHROMES C

Released:
DOI: 10.2210/pdb1ycc/pdb
PDB entry 1ycc coloured by chain, front view.
PDB entry 1ycc coloured by chain, side view.
PDB entry 1ycc coloured by chain, top view.
Source organism: Saccharomyces cerevisiae
Primary publication:
High-resolution refinement of yeast iso-1-cytochrome c and comparisons with other eukaryotic cytochromes c.
Louie GV, Brayer GD
J Mol Biol 214 527-55 (1990)
PMID: 2166169

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132233 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Cytochrome c isoform 1 Chain: A
Molecule details ›
Chain: A
Length: 108 amino acids
Theoretical weight: 12.12 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Not provided
UniProt:
  • Canonical: P00044 (Residues: 2-109; Coverage: 99%)
Gene names: CYC1, J1653, YJR048W
Sequence domains: Cytochrome c
Structure domains: Cytochrome c-like domain

Ligands and Environments

2 bound ligands:
Ligand SO4 1 x SO4
Ligand HEC 1 x HEC
1 modified residue:
Ligand M3L 1 x M3L

Experiments and Validation Details

Entry percentile scores
Spacegroup: P43212
Unit cell:
a: 36.46Å b: 36.46Å c: 136.86Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.192 not available not available
Expression system: Not provided

Quick links

Citations

12 review citations

Structure-function relationships in heme-proteins.
Paoli et al. (2002)
11 more

48 mentions without citation

Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers.
Liu et al. (2014)
47 more