› 2d4w

X-ray diffraction
2.3Å resolution

Crystal structure of glycerol kinase from Cellulomonas sp. NT3060

Released:
DOI: 10.2210/pdb2d4w/pdb
PDB entry 2d4w coloured by chain, front view.
PDB entry 2d4w coloured by chain, side view.
PDB entry 2d4w coloured by chain, top view.
Source organism: Cellulomonas sp.
Entry authors: Imada K, Tamura T, Namba K, Inagaki K

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-162665 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
glycerol kinase Chains: A, B
Molecule details ›
Chains: A, B
Length: 504 amino acids
Theoretical weight: 55.2 KDa
Source organism: Cellulomonas sp.
Expression system: Escherichia coli
Structure domains: Nucleotidyltransferase; domain 5

Ligands and Environments

1 bound ligand:
Ligand MPD 4 x MPD
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL41XU
Spacegroup: P41212
Unit cell:
a: 105.43Å b: 105.43Å c: 195.715Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.195 0.193 0.24
Expression system: Escherichia coli

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