› 2hbb

X-ray diffraction
1.9Å resolution

Crystal Structure of the N-terminal Domain of Ribosomal Protein L9 (NTL9)

Released:
DOI: 10.2210/pdb2hbb/pdb
PDB entry 2hbb coloured by chain, front view.
PDB entry 2hbb coloured by chain, side view.
PDB entry 2hbb coloured by chain, top view.
Source organism: Geobacillus stearothermophilus
Primary publication:
Energetically significant networks of coupled interactions within an unfolded protein.
Cho JH, Meng W, Sato S, Kim EY, Schindelin H, Raleigh DP
Proc Natl Acad Sci U S A 111 12079-84 (2014)
PMID: 25099351

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo dimer
Assembly name:
PDBe Complex ID:
PDB-CPX-135840 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Large ribosomal subunit protein bL9 Chain: A
Molecule details ›
Chain: A
Length: 51 amino acids
Theoretical weight: 5.56 KDa
Source organism: Geobacillus stearothermophilus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P02417 (Residues: 1-51; Coverage: 34%)
Gene name: rplI
Sequence domains: Ribosomal protein L9, N-terminal domain
Structure domains: Ribosomal protein L9, N-terminal domain

Ligands and Environments

1 bound ligand:
Ligand ZN 4 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X26C, null
Spacegroup: P41212
Unit cell:
a: 53.918Å b: 53.918Å c: 36.339Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.199 0.197 0.236
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

2 review citations

Hypothesis: structural heterogeneity of the unfolded proteins originating from the coupling of the local clusters and the long-range distance distribution.
Takahashi et al. (2018)
1 more

17 mentions without citation

Fast-folding proteins under stress.
Dave et al. (2015)
16 more