› 2kfd

Solution NMR

Prp40 FF4 domain

Released:
DOI: 10.2210/pdb2kfd/pdb
PDB entry 2kfd coloured by chain, ensemble of 15 models, front view.
PDB entry 2kfd coloured by chain, ensemble of 15 models, side view.
PDB entry 2kfd coloured by chain, ensemble of 15 models, top view.
Source organism: Saccharomyces cerevisiae
Primary publication:
Solution structure of the fourth FF domain of yeast Prp40 splicing factor.
Bonet R, Ruiz L, Morales B, Macias MJ
Proteins 77 1000-3 (2009)
PMID: 19722265

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-152559 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Pre-mRNA-processing protein PRP40 Chain: A
Molecule details ›
Chain: A
Length: 69 amino acids
Theoretical weight: 8.22 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P33203 (Residues: 488-552; Coverage: 11%)
Gene names: PRP40, YKL012W, YKL165
Structure domains: FF domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 81%
Refinement method: simulated annealing
Expression system: Escherichia coli

Quick links

Citations

5 citation in other articles

Structure-function analysis of the 5' end of yeast U1 snRNA highlights genetic interactions with the Msl5*Mud2 branchpoint-binding complex and other spliceosome assembly factors.
Schwer et al. (2013)
4 more

2 mentions without citation

A unified mechanism for intron and exon definition and back-splicing.
Li et al. (2019)
1 more