› 2nlc

X-ray diffraction
1.65Å resolution

Human beta-defensin-1 (mutant Ser8Ala)

Released:
DOI: 10.2210/pdb2nlc/pdb
PDB entry 2nlc coloured by chain, front view.
PDB entry 2nlc coloured by chain, side view.
PDB entry 2nlc coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Studies of the biological properties of human beta-defensin 1.
Pazgier M, Prahl A, Hoover DM, Lubkowski J
J Biol Chem 282 1819-29 (2007)
PMID: 17071614

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domain:

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo tetramer
homo dimer
Assembly name:
PDBe Complex ID:
PDB-CPX-157949 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Beta-defensin 1 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 36 amino acids
Theoretical weight: 3.92 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P60022 (Residues: 33-68; Coverage: 77%)
Gene names: BD1, DEFB1, HBD1
Sequence domains: Beta defensin

Ligands and Environments

2 bound ligands:
Ligand SO4 6 x SO4
Ligand ACT 1 x ACT
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU200
Spacegroup: P1
Unit cell:
a: 25.74Å b: 33.19Å c: 41.85Å
α: 73.9° β: 85.5° γ: 86.2°
R-values:
R R work R free
0.168 0.166 0.204
Expression system: Escherichia coli

Quick links

Citations

6 review citations

Topical antimicrobials for burn wound infections.
Dai et al. (2010)
5 more