› 2o45

X-ray diffraction
3.6Å resolution

Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874

Released:
DOI: 10.2210/pdb2o45/pdb
PDB entry 2o45 coloured by chain, front view.
PDB entry 2o45 coloured by chain, side view.
PDB entry 2o45 coloured by chain, top view.
Source organism: Deinococcus radiodurans
Entry authors: Baram D, Pyetan E, Auerbach-Nevo T, Yonath A

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-250513 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
23S ribosomal RNA Chain: A
Molecule details ›
Chain: A
Length: 2880 nucleotides
Theoretical weight: 933.41 KDa
Source organism: Deinococcus radiodurans
Sequence domains: Bacterial large subunit ribosomal RNA

Ligands and Environments

1 bound ligand:
Ligand RU6 1 x RU6
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: I222
Unit cell:
a: 170.01Å b: 411.475Å c: 697.616Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.283 not available 0.364

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