› 2olm

X-ray diffraction
1.48Å resolution

ArfGap domain of HIV-1 Rev binding protein

Released:
DOI: 10.2210/pdb2olm/pdb
PDB entry 2olm coloured by chain, front view.
PDB entry 2olm coloured by chain, side view.
PDB entry 2olm coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Tong Y, Tempel W, Shen L, Dimov S, Landry R, Arrowsmith CH, Edwards AM, Sundstrom M, Weigelt J, Bochkarev A, Park H, Structural Genomics Consortium (SGC)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-156578 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Arf-GAP domain and FG repeat-containing protein 1 Chain: A
Molecule details ›
Chain: A
Length: 140 amino acids
Theoretical weight: 16.16 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P52594 (Residues: 4-141; Coverage: 25%)
Gene names: AGFG1, HRB, RAB, RIP
Sequence domains: Putative GTPase activating protein for Arf
Structure domains: Arf GTPase activating protein

Ligands and Environments

5 bound ligands:
Ligand ZN 1 x ZN
Ligand SO4 2 x SO4
Ligand UNL 1 x UNL
Ligand UNX 9 x UNX
Ligand GOL 1 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 17-ID
Spacegroup: P43212
Unit cell:
a: 57.883Å b: 57.883Å c: 83.696Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.18 0.18 0.195
Expression system: Escherichia coli

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