› 3ijh

X-ray diffraction
2.1Å resolution

Structure of S67-27 in Complex with Ko

Released:
DOI: 10.2210/pdb3ijh/pdb
PDB entry 3ijh coloured by chain, front view.
PDB entry 3ijh coloured by chain, side view.
PDB entry 3ijh coloured by chain, top view.
Source organism: Mus musculus
Primary publication:
The role of CDR H3 in antibody recognition of a synthetic analog of a lipopolysaccharide antigen.
Brooks CL, Blackler RJ, Sixta G, Kosma P, Müller-Loennies S, Brade L, Hirama T, MacKenzie CR, Brade H, Evans SV
Glycobiology 20 138-47 (2010)
PMID: 19767317

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-213286 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Immunoglobulin light chain (IGG3) Chains: A, C
Molecule details ›
Chains: A, C
Length: 219 amino acids
Theoretical weight: 24.19 KDa
Source organism: Mus musculus
Structure domains: Immunoglobulins
Immunoglobulin heavy chain (IGG3) Chains: B, D
Molecule details ›
Chains: B, D
Length: 226 amino acids
Theoretical weight: 24.53 KDa
Source organism: Mus musculus
Structure domains: Immunoglobulins

Ligands and Environments

2 bound ligands:
Ligand KO2 2 x KO2
Ligand MG 2 x MG
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P212121
Unit cell:
a: 46.46Å b: 127.88Å c: 156.21Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.215 0.213 0.254

Quick links

Citations

1 review citation

Computer-aided antibody design.
Kuroda et al. (2012)
5 other articles

4 mentions without citation

Capsid antibodies to different adeno-associated virus serotypes bind common regions.
Gurda et al. (2013)
3 more