› 3jtt

X-ray diffraction
2.8Å resolution

Cystal structure of Rhesus macaque MHC class I:Mamu-A*02

Released:
DOI: 10.2210/pdb3jtt/pdb
PDB entry 3jtt coloured by chain, front view.
PDB entry 3jtt coloured by chain, side view.
PDB entry 3jtt coloured by chain, top view.
Source organisms:
Entry authors: Dai L, Feng Y, Qi J, Gao GF

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-174229 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Ig-like domain-containing protein Chains: A, D, G
Molecule details ›
Chains: A, D, G
Length: 276 amino acids
Theoretical weight: 32.11 KDa
Source organism: Macaca mulatta
Expression system: Escherichia coli
UniProt:
  • Canonical: Q30597 (Residues: 17-292; Coverage: 81%)
Sequence domains:
Structure domains:
Beta-2-microglobulin Chains: B, E, H
Molecule details ›
Chains: B, E, H
Length: 100 amino acids
Theoretical weight: 11.79 KDa
Source organism: Macaca mulatta
Expression system: Escherichia coli
UniProt:
  • Canonical: Q6V7J5 (Residues: 21-119; Coverage: 100%)
Gene name: B2M
Sequence domains: Immunoglobulin C1-set domain
Structure domains: Immunoglobulins
Protein Nef Chains: C, F, I
Molecule details ›
Chains: C, F, I
Length: 9 amino acids
Theoretical weight: 1.01 KDa
Source organism: Simian immunodeficiency virus
Expression system: Not provided
UniProt:
  • Canonical: Q9WH73 (Residues: 159-167; Coverage: 3%)
Gene name: nef

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU MICROMAX-007 HF
Spacegroup: P212121
Unit cell:
a: 128.993Å b: 129.007Å c: 129.026Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.216 0.214 0.255
Expression systems:
  • Escherichia coli
  • Not provided

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