› 3s9j

X-ray diffraction
1.75Å resolution

Crystal structure of a member of duf4221 family (BVU_1028) from Bacteroides vulgatus atcc 8482 at 1.75 A resolution

Released:
DOI: 10.2210/pdb3s9j/pdb
PDB entry 3s9j coloured by chain, front view.
PDB entry 3s9j coloured by chain, side view.
PDB entry 3s9j coloured by chain, top view.
Source organism: Phocaeicola vulgatus ATCC 8482
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107858 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF4221 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 369 amino acids
Theoretical weight: 43.64 KDa
Source organism: Phocaeicola vulgatus ATCC 8482
Expression system: Escherichia coli
UniProt:
  • Canonical: A6KZ57 (Residues: 27-394; Coverage: 93%)
Gene name: BVU_1028
Sequence domains: Domain of unknown function (DUF4221)

Ligands and Environments

3 bound ligands:
Ligand NA 3 x NA
Ligand FMT 13 x FMT
Ligand GOL 3 x GOL
1 modified residue:
Ligand MSE 9 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P63
Unit cell:
a: 113.551Å b: 113.551Å c: 77.697Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.144 0.142 0.169
Expression system: Escherichia coli

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