› 3u5w

X-ray diffraction
2.05Å resolution

Crystal Structure of a probable FAD-binding, putative uncharacterized protein from Brucella melitensis, apo form

Released:
DOI: 10.2210/pdb3u5w/pdb
PDB entry 3u5w coloured by chain, front view.
PDB entry 3u5w coloured by chain, side view.
PDB entry 3u5w coloured by chain, top view.
Source organism: Brucella abortus 2308
Entry author: Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-174195 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Pyridoxamine 5'-phosphate oxidase family protein Chain: A
Molecule details ›
Chain: A
Length: 148 amino acids
Theoretical weight: 17.13 KDa
Source organism: Brucella abortus 2308
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q2YQN9 (Residues: 1-144; Coverage: 100%)
Gene name: BAB1_1392
Sequence domains: Pyridoxamine 5'-phosphate oxidase
Structure domains: Electron Transport, Fmn-binding Protein; Chain A

Ligands and Environments

2 bound ligands:
Ligand EDO 1 x EDO
Ligand CL 2 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU FR-E SUPERBRIGHT
Spacegroup: P3221
Unit cell:
a: 77.18Å b: 77.18Å c: 63.49Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.212 0.211 0.239
Expression system: Escherichia coli BL21(DE3)

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