4bxs

X-ray diffraction
3.32Å resolution

Crystal Structure of the Prothrombinase Complex from the Venom of Pseudonaja Textilis

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-176394 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (5 distinct):
Venom prothrombin activator pseutarin-C catalytic subunit Chain: A
Molecule details ›
Chain: A
Length: 423 amino acids
Theoretical weight: 47.04 KDa
Source organism: Pseudonaja textilis
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q56VR3 (Residues: 41-467; Coverage: 95%)
Sequence domains:
Structure domains:
Venom prothrombin activator pseutarin-C non-catalytic subunit Chain: V
Molecule details ›
Chain: V
Length: 1430 amino acids
Theoretical weight: 162.83 KDa
Source organism: Pseudonaja textilis
Expression system: Cricetulus griseus
UniProt:
  • Canonical: Q7SZN0 (Residues: 31-1460; Coverage: 100%)
Sequence domains:
Structure domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, FUC
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG
3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04
Spacegroup: P43212
Unit cell:
a: 115.31Å b: 115.31Å c: 429.52Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.301 0.298 0.368
Expression systems:
  • Escherichia coli BL21(DE3)
  • Cricetulus griseus