4c9f

X-ray diffraction
2.6Å resolution

Structure of SIGN-R1 in complex with Sulfodextran

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
PDBe Complex ID:
PDB-CPX-183990 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (3 distinct):
CD209 antigen-like protein B Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 134 amino acids
Theoretical weight: 15.52 KDa
Source organism: Mus musculus
UniProt:
  • Canonical: Q8CJ91 (Residues: 191-323; Coverage: 41%)
Gene name: Cd209b
Sequence domains: Lectin C-type domain
Structure domains: Mannose-Binding Protein A, subunit A

Ligands and Environments

Carbohydrate polymer : NEW Components: GQ1, GLC
Carbohydrate polymer : NEW Components: GQ1, GLC
3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID23-2
Spacegroup: C2
Unit cell:
a: 144.025Å b: 97.959Å c: 73.846Å
α: 90° β: 120.86° γ: 90°
R-values:
R R work R free
0.193 0.191 0.233