4gn5

X-ray diffraction
1.86Å resolution

OBody AM3L15 bound to hen egg-white lysozyme

Released:

Function and Biology Details

Reaction catalysed:
Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132856 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
OBody AM3L15 Chains: A, B
Molecule details ›
Chains: A, B
Length: 113 amino acids
Theoretical weight: 12.38 KDa
Source organism: Pyrobaculum aerophilum
Expression system: Escherichia coli DH5[alpha]
Structure domains: Nucleic acid-binding proteins
Lysozyme C Chains: C, D
Molecule details ›
Chains: C, D
Length: 129 amino acids
Theoretical weight: 14.33 KDa
Source organism: Gallus gallus
UniProt:
  • Canonical: P00698 (Residues: 19-147; Coverage: 100%)
Gene name: LYZ
Sequence domains: C-type lysozyme/alpha-lactalbumin family
Structure domains: Lysozyme

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU
Spacegroup: P21
Unit cell:
a: 51.99Å b: 58.83Å c: 95.18Å
α: 90° β: 95.43° γ: 90°
R-values:
R R work R free
0.175 0.173 0.202
Expression system: Escherichia coli DH5[alpha]