› 4quq

X-ray diffraction
2.27Å resolution

Crystal structure of stachydrine demethylase in complex with azide

Released:
DOI: 10.2210/pdb4quq/pdb
PDB entry 4quq coloured by chain, front view.
PDB entry 4quq coloured by chain, side view.
PDB entry 4quq coloured by chain, top view.
Source organism: Sinorhizobium meliloti 1021
Entry authors: Agarwal R, Andi B, Gizzi A, Bonanno JB, Almo SC, Orville AM

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-187967 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Rieske domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 435 amino acids
Theoretical weight: 49.12 KDa
Source organism: Sinorhizobium meliloti 1021
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q92ZP9 (Residues: 1-412; Coverage: 100%)
Gene name: SMa0751
Sequence domains:
Structure domains:

Ligands and Environments

5 bound ligands:
Ligand FES 1 x FES
Ligand FE 1 x FE
Ligand GOL 1 x GOL
Ligand NCO 1 x NCO
Ligand AZI 1 x AZI
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X26C
Spacegroup: P6322
Unit cell:
a: 98.44Å b: 98.44Å c: 178.752Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.196 0.193 0.255
Expression system: Escherichia coli BL21(DE3)

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