5e6o

X-ray diffraction
1.8Å resolution

Crystal structure of C. elegans LGG-2 bound to an AIM/LIR motif

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-165590 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Protein lgg-2 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 118 amino acids
Theoretical weight: 13.85 KDa
Source organism: Caenorhabditis elegans
Expression system: Escherichia coli
UniProt:
  • Canonical: Q23536 (Residues: 17-130; Coverage: 88%)
Gene names: ZK593.6, lgg-2
Sequence domains: Autophagy protein Atg8 ubiquitin like
Structure domains: Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1
TRP-GLU-GLU-LEU Chains: E, F, G, H
Molecule details ›
Chains: E, F, G, H
Length: 4 amino acids
Theoretical weight: 576 Da
Source organism: Scheffersomyces stipitis
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Spacegroup: P21
Unit cell:
a: 49.933Å b: 62.351Å c: 67.599Å
α: 90° β: 109.54° γ: 90°
R-values:
R R work R free
0.181 0.177 0.241
Expression systems:
  • Escherichia coli
  • Not provided