› 5kbp

X-ray diffraction
2.4Å resolution

The crystal structure of an alpha-mannosidase from Enterococcus faecalis V583

Released:
DOI: 10.2210/pdb5kbp/pdb
PDB entry 5kbp coloured by chain, front view.
PDB entry 5kbp coloured by chain, side view.
PDB entry 5kbp coloured by chain, top view.
Source organism: Enterococcus faecalis V583
Entry authors: Tan K, Chhor G, Jedrzejczak R, Anderson WF, Joachimiak A, Center for Structural Genomics of Infectious Diseases (CSGID)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-182796 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glycoside hydrolase family 38 central domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 899 amino acids
Theoretical weight: 102.66 KDa
Source organism: Enterococcus faecalis V583
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q834E8 (Residues: 1-896; Coverage: 100%)
Gene name: EF_1707
Sequence domains:
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand SO4 24 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P3121
Unit cell:
a: 127.834Å b: 127.834Å c: 223.716Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.189 0.187 0.232
Expression system: Escherichia coli BL21(DE3)

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