› 9bna

X-ray diffraction
1.9Å resolution

RE-REFINEMENT OF THE B-DODECAMER D(CGCGAATTCGCG) WITH A COMPARATIVE ANALYSIS OF THE SOLVENT IN IT AND IN THE Z-HEXAMER D(5BRCG5BRCG5BRCG)

Released:
DOI: 10.2210/pdb9bna/pdb
PDB entry 9bna coloured by chain, front view.
PDB entry 9bna coloured by chain, side view.
PDB entry 9bna coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Re-refinement of the B-dodecamer d(CGCGAATTCGCG) with a comparative analysis of the solvent in it and in the Z-hexamer d(5BrCG5BrCG5BrCG).
Westhof E
J Biomol Struct Dyn 5 581-600 (1987)
PMID: 3271485

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-122635 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') Chains: A, B
Molecule details ›
Chains: A, B
Length: 12 nucleotides
Theoretical weight: 3.66 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P212121
Unit cell:
a: 24.87Å b: 40.39Å c: 66.2Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.188 not available not available
Expression system: Not provided

Quick links

Citations

3 review citations

Crystal studies of B-DNA: the answers and the questions.
Berman HM. (1997)
2 more

14 mentions without citation

My 65 years in protein chemistry.
Scheraga HA. (2015)
13 more