› 2ofe

X-ray diffraction
1.7Å resolution

The Crystal structure of Sclerotium rolfsii lectin in complex with N-acetyl-D-glucosamine

Released:
DOI: 10.2210/pdb2ofe/pdb
PDB entry 2ofe coloured by chain, front view.
PDB entry 2ofe coloured by chain, side view.
PDB entry 2ofe coloured by chain, top view.
Source organism: Athelia rolfsii
Primary publication:
Structural basis for the carbohydrate recognition of the Sclerotium rolfsii lectin.
Leonidas DD, Swamy BM, Hatzopoulos GN, Gonchigar SJ, Chachadi VB, Inamdar SR, Zographos SE, Oikonomakos NG
J Mol Biol 368 1145-61 (2007)
PMID: 17391699

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assemblies composition:
homo dimer (preferred)
homo tetramer
Assembly name:
PDBe Complex ID:
PDB-CPX-163104 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Sclerotium rolfsii lectin Chains: A, B
Molecule details ›
Chains: A, B
Length: 142 amino acids
Theoretical weight: 16.09 KDa
Source organism: Athelia rolfsii
Structure domains: Cytolysin/lectin

Ligands and Environments

3 bound ligands:
Ligand NAG 2 x NAG
Ligand ACT 3 x ACT
Ligand MPD 3 x MPD
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SRS BEAMLINE PX14.1
Spacegroup: P42212
Unit cell:
a: 99.768Å b: 99.768Å c: 64.08Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.158 0.157 0.184

Quick links

Citations

6 review citations

Choosing the right lifestyle: adhesion and development in Saccharomyces cerevisiae.
Brückner et al. (2012)
5 more

2 mentions without citation

Structural investigation of a novel N-acetyl glucosamine binding chi-lectin which reveals evolutionary relationship with class III chitinases.
Patil et al. (2013)
1 more