› 3e85

X-ray diffraction
1.95Å resolution

Crystal Structure of Pathogenesis-related Protein LlPR-10.2B from yellow lupine in complex with Diphenylurea

Released:
DOI: 10.2210/pdb3e85/pdb
PDB entry 3e85 coloured by chain, front view.
PDB entry 3e85 coloured by chain, side view.
PDB entry 3e85 coloured by chain, top view.
Source organism: Lupinus luteus
Primary publication:
Cytokinin-induced structural adaptability of a Lupinus luteus PR-10 protein.
Fernandes H, Bujacz A, Bujacz G, Jelen F, Jasinski M, Kachlicki P, Otlewski J, Sikorski MM, Jaskolski M
FEBS J 276 1596-609 (2009)
PMID: 19220853

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-192288 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Class 10 plant pathogenesis-related protein 2B Chain: A
Molecule details ›
Chain: A
Length: 158 amino acids
Theoretical weight: 16.91 KDa
Source organism: Lupinus luteus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9LLQ2 (Residues: 1-158; Coverage: 100%)
Gene name: PR10.2B
Sequence domains: Pathogenesis-related protein Bet v 1 family
Structure domains: Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4

Ligands and Environments

2 bound ligands:
Ligand BSU 4 x BSU
Ligand NA 2 x NA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE X11
Spacegroup: C2221
Unit cell:
a: 34.362Å b: 73.256Å c: 99.956Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.193 0.188 0.246
Expression system: Escherichia coli

Quick links

Citations

4 review citations

Structural and functional aspects of PR-10 proteins.
Fernandes et al. (2013)
3 more

5 mentions without citation

Crystallographically mapped ligand binding differs in high and low IgE binding isoforms of birch pollen allergen bet v 1.
Kofler et al. (2012)
4 more