Ligands and environments ‹ 4c3i ‹ Protein Data Bank in Europe (PDBe)

SO4 2664(A) Environment details ›

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FileManager.getAtomSetCollectionFromFile(https://www.ebi.ac.uk/pdbe/entry-files/download/4c3i.cif)

FileManager opening 1 https://www.ebi.ac.uk/pdbe/entry-files/download/4c3i.cif

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TITLE: Crystal Structure of the 14-Subunit RNA Polymerase I

Setting space group name to HM:C 1 2 1

found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

unknown CIF bond order: doub

unknown CIF bond order: sing

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Time for openFile(*4c3i): 4276 ms

reading 34252 atoms

ModelSet: haveSymmetry:false haveUnitcells:true haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

34252 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

TITLE: Crystal Structure of the 14-Subunit RNA Polymerase I

found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z

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contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;

Contact pairs: 13

Contacts: 0

RasMol pseudo-hbond calculation

0 hydrogen bonds

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Contact pairs: 1

Contacts: 0

RasMol pseudo-hbond calculation

0 hydrogen bonds

Script completed

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contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;

Contact pairs: 0

Contacts: 0

RasMol pseudo-hbond calculation

0 hydrogen bonds

Script completed

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Contact pairs: 0

Contacts: 0

RasMol pseudo-hbond calculation

0 hydrogen bonds

Script completed

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contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;

Contact pairs: 3

Contacts: 0

RasMol pseudo-hbond calculation

0 hydrogen bonds

Script completed

Jmol script terminated

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contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;

Contact pairs: 2

Contacts: 0

RasMol pseudo-hbond calculation

0 hydrogen bonds

Script completed

Jmol script terminated

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contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;

Contact pairs: 0

Contacts: 0

RasMol pseudo-hbond calculation

0 hydrogen bonds

Script completed

Jmol script terminated

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contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;

Contact pairs: 0

Contacts: 0

RasMol pseudo-hbond calculation

0 hydrogen bonds

Script completed

Jmol script terminated

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contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;

Contact pairs: 0

Contacts: 0

RasMol pseudo-hbond calculation

0 hydrogen bonds

Script completed

Jmol script terminated

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contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;

Contact pairs: 4

s://www.ebi.ac.uk/pdbe/software/jmol-future/jsmol/j2s/J/jvxl/readers/IsoIntersectReader.js

Contacts: 3 with net volume 0.8136048927152317 A^3

RasMol pseudo-hbond calculation

0 hydrogen bonds

Script completed

Jmol script terminated

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contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;

Contact pairs: 1

Contacts: 0

RasMol pseudo-hbond calculation

0 hydrogen bonds

Script completed

Jmol script terminated

script 13 started

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debugScript = false

showScript = 0

chainCaseSensitive = true

measurementUnits = "angstroms"

autobond = true

forceAutoBond = true

contact ID "hb" {environmentAtoms} hbond color TRANSLUCENT 0.2 purple;

Contact pairs: 7

Contacts: 5 with net volume 2.8796364997998314 A^3

RasMol pseudo-hbond calculation

0 hydrogen bonds

Script completed

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SO4 2665(A) Environment details ›

SO4 1143(K) Environment details ›

ZN 2666(A) Environment details ›

ZN 2667(A) Environment details ›

ZN 2205(B) Environment details ›

ZN 1126(I) Environment details ›

ZN 1127(I) Environment details ›

ZN 1070(J) Environment details ›

ZN 1071(L) Environment details ›

MG 2204(B) Environment details ›

MPD 1317(G) Environment details ›

Protein Data Bank in Europe

4 bound ligands:

Quick links

PDBe › 4c3i › Ligands and Environments

4 bound ligands:

Quick links

4c3i › Ligands and Environments