› 5o77

X-ray diffraction
1.5Å resolution

Klebsiella pneumoniae OmpK35

Released:
DOI: 10.2210/pdb5o77/pdb
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PDB entry 5o77 coloured by chain, front view.
PDB entry 5o77 coloured by chain, side view.
PDB entry 5o77 coloured by chain, top view.
Source organism: Klebsiella pneumoniae
Primary publication:
Getting Drugs into Gram-Negative Bacteria: Rational Rules for Permeation through General Porins.
Acosta-Gutiérrez S, Ferrara L, Pathania M, Masi M, Wang J, Bodrenko I, Zahn M, Winterhalter M, Stavenger RA, Pagès JM, Naismith JH, van den Berg B, Page MGP, Ceccarelli M
ACS Infect Dis 4 1487-1498 (2018)
PMID: 29962203

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-103627 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
OmpK35 Chain: A
Molecule details ›
Chain: A
Length: 337 amino acids
Theoretical weight: 37.32 KDa
Source organism: Klebsiella pneumoniae
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: A0A1P8FCM7 (Residues: 22-358; Coverage: 94%)
Sequence domains: Gram-negative porin

Ligands and Environments

2 bound ligands:
Ligand TRS 2 x TRS
Ligand C8E 2 x C8E
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: DIAMOND BEAMLINE I04-1
Spacegroup: P63
Unit cell:
a: 77.312Å b: 77.312Å c: 114.044Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.158 0.157 0.185
Expression system: Escherichia coli BL21

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Citations

14 review citations

Enterobacter spp.: Update on Taxonomy, Clinical Aspects, and Emerging Antimicrobial Resistance.
Davin-Regli et al. (2019)
13 more

4 mentions without citation

Needleless electrospun phytochemicals encapsulated nanofibre based 3-ply biodegradable mask for combating COVID-19 pandemic.
Patil et al. (2021)
3 more

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