› 6d9e

X-ray diffraction
2.85Å resolution

Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GlcNAc (open, reduced)

Released:
DOI: 10.2210/pdb6d9e/pdb
PDB entry 6d9e coloured by chain, front view.
PDB entry 6d9e coloured by chain, side view.
PDB entry 6d9e coloured by chain, top view.
Source organism: Corynebacterium diphtheriae
Entry authors: Wangkanont K, Kiessling LL, Forest KT

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-166583 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
UDP-galactopyranose mutase Chain: A
Molecule details ›
Chain: A
Length: 393 amino acids
Theoretical weight: 45.74 KDa
Source organism: Corynebacterium diphtheriae
Expression system: Escherichia coli BL21(DE3)
Structure domains: NAD(P)-binding Rossmann-like Domain

Ligands and Environments

5 bound ligands:
Ligand FDA 1 x FDA
Ligand UD1 1 x UD1
Ligand NA 1 x NA
Ligand IPA 3 x IPA
Ligand SO4 1 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-G
Spacegroup: P41212
Unit cell:
a: 97.17Å b: 97.17Å c: 128.86Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.168 0.166 0.218
Expression system: Escherichia coli BL21(DE3)

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