› 6rck

X-ray diffraction
2.03Å resolution

Crystal structure of the OmpK36 GD insertion chimera from Klebsiella pneumonia

Released:
DOI: 10.2210/pdb6rck/pdb
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PDB entry 6rck coloured by chain, front view.
PDB entry 6rck coloured by chain, side view.
PDB entry 6rck coloured by chain, top view.
Source organism: Klebsiella pneumoniae
Primary publication:
OmpK36-mediated Carbapenem resistance attenuates ST258 Klebsiella pneumoniae in vivo.
Wong JLC, Romano M, Kerry LE, Kwong HS, Low WW, Brett SJ, Clements A, Beis K, Frankel G
OpenAccess logo Nat Commun 10 3957 (2019)
PMID: 31477712

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-112798 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
OmpK36 Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 347 amino acids
Theoretical weight: 38.23 KDa
Source organism: Klebsiella pneumoniae
Expression system: Escherichia coli
UniProt:
  • Canonical: D6QLY1 (Residues: 22-367; Coverage: 100%)
Gene names: NCTC13443_05288, ompC_2, ompK36
Sequence domains: Gram-negative porin

Ligands and Environments

3 bound ligands:
Ligand LDA 3 x LDA
Ligand C8E 8 x C8E
Ligand P6L 1 x P6L
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: DIAMOND BEAMLINE I24
Spacegroup: C2
Unit cell:
a: 232.458Å b: 74.412Å c: 90.112Å
α: 90° β: 111.73° γ: 90°
R-values:
R R work R free
0.21 0.208 0.246
Expression system: Escherichia coli

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Citations

5 review citations

Population genomics of Klebsiella pneumoniae.
Wyres et al. (2020)
4 more

2 mentions without citation

Mating pair stabilization mediates bacterial conjugation species specificity.
Low et al. (2022)
1 more

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