› 7vkf

X-ray diffraction
1.6Å resolution

Reduced enzyme of FAD-dpendent Glucose Dehydrogenase complex with D-glucono-1,5-lactone at pH8.5

Released:
DOI: 10.2210/pdb7vkf/pdb
PDB entry 7vkf coloured by chain, front view.
PDB entry 7vkf coloured by chain, side view.
PDB entry 7vkf coloured by chain, top view.
Source organism: Aspergillus oryzae
Entry authors: Nakajima Y, Nishiya Y, Ito K

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-103744 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glucose-methanol-choline oxidoreductase N-terminal domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 572 amino acids
Theoretical weight: 61.68 KDa
Source organism: Aspergillus oryzae
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A1S9DW10 (Residues: 23-593; Coverage: 99%)
Gene name: OAory_01010120
Sequence domains:

Ligands and Environments

3 bound ligands:
Ligand LGC 1 x LGC
Ligand FDA 1 x FDA
Ligand B3P 1 x B3P
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL38B1
Spacegroup: P41212
Unit cell:
a: 95.421Å b: 95.421Å c: 123.841Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.159 0.158 0.188
Expression system: Escherichia coli

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