Uniprot accession / id : (P29322)
 
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Entry Information
Entry status  (1)
REL
(3)
 
Experimental methods  (2)
Solution NMR
(2)
X-ray diffraction
(1)
 
Authors  (21)
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
(2)
Yokoyama S
(2)
Arrowsmith CH
(1)
Bochkarev A
(1)
Bountra C
(1)
Dhe-Paganon S
(1)
Edwards AM
(1)
Goroncy A
(1)
Hayashi F
(1)
Inoue M
(1)
Kania J
(1)
Kigawa T
(1)
Kobayashi N
(1)
Koshiba S
(1)
Nagashima T
(1)
Qin XR
(1)
Structural Genomics Consortium (SGC)
(1)
Tochio N
(1)
Walker JR
(1)
Weigelt J
(1)
Yermekbayeva L
(1)
 
Homo / hetero assembly  (1)
homo
(3)
 
Assembly composition  (1)
protein structure
(3)
 
Assembly polymer count  (1)
monomer
(3)
 
Resolution distribution
2.0 - 2.5
(1)
 
Release year distribution
2000 - 2005
(2)
2005 - 2010
(2)
 
Journal  (1)
To be published
(3)
 
Macromolecules
Organism superkingdom  (1)
Eukaryota
(3)
 
Organism name  (1)
Homo sapiens
(3)
 
Molecule name  (6)
EK3
(3)
EPH- and ELK-related kinase
(3)
EPH-like kinase 3
(3)
Ephrin type-A receptor 8
(3)
Tyrosine-protein kinase receptor EEK
(3)
hEK3
(3)
 
Molecule type  (1)
Protein
(3)
 
Gene names  (4)
EEK
(3)
EPHA8
(3)
HEK3
(3)
KIAA1459
(3)
 
Interacting ligands  (3)
BME : BETA-MERCAPTOETHANOL
(1)
GOL : GLYCEROL
(1)
SO4 : SULFATE ION
(1)
 
Function and Biology
EC number / name  (1)
2.7.10.1 : Receptor protein-tyrosine kinase
(3)
 
Biological function  (3)
ATP binding
(1)
protein kinase activity
(1)
protein tyrosine kinase activity
(1)
 
Biological process  (1)
protein phosphorylation
(1)
 
Sequence and Structure classification
SCOP fold  (2)
Immunoglobulin-like beta-sandwich
(1)
SAM domain-like
(1)
 
SCOP family  (2)
Fibronectin type III
(1)
SAM (sterile alpha motif) domain
(1)
 
CATH class  (3)
Mainly Alpha
(2)
Alpha Beta
(1)
Mainly Beta
(1)
 
CATH topology  (4)
DNA polymerase; domain 1
(1)
Immunoglobulin-like
(1)
Phosphorylase Kinase; domain 1
(1)
Transferase(Phosphotransferase); domain 1
(1)
 
Pfam accession / name  (4)
PF00041 : fn3
(1)
PF00536 : SAM_1
(1)
PF07714 : PK_Tyr_Ser-Thr
(1)
PF14575 : EphA2_TM
(1)
 
Experimental Information
Diffraction protocol  (1)
Single wavelength
(2)
 
Diffraction radiation source type  (1)
Synchrotron
(1)
 
Diffraction source  (1)
APS BEAMLINE 23-ID-B
(1)
 
Synchrotron site  (1)
APS
(1)
 
Diffraction detector type  (1)
CCD
(1)
 
Refinement software  (1)
REFMAC
(1)
 
NMR
NMR software packages  (7)
KUJIRA
(2)
NMRPipe
(2)
NMRView
(2)
CYANA
(1)
CYANA-CANDID
(1)
VNMR
(1)
XwinNMR
(1)
 
NMR Field Strength
700.0 - 800
(2)
800.0 - 900
(2)
900.0 - 1000
(1)
 
Representative Structures
Representative Structures
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Entries 1 to 3 of 3
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Solution structure of the second fn3 domain of Eph receptor A8 protein
Qin XR, Nagashima T, Hayashi F, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
To be published
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Ephrin type-A receptor 8 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-151404 (Preferred)   search this ID
PDBe-KB: P29322   
Solution NMR
Released: 16 Nov 2005
Model geometry
Fit model/data
Data not analysed
1x5l
1x5l
1x5l
Sterile alpha motif (SAM) domain of ephrin type-A receptor 8
Goroncy A, Kigawa T, Koshiba S, Kobayashi N, Tochio N, Inoue M, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
To be published
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Ephrin type-A receptor 8 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-151404 (Preferred)   search this ID
PDBe-KB: P29322   
Solution NMR
Released: 11 May 2004
Model geometry
Fit model/data
Data not analysed
1ucv
1ucv
1ucv
Kinase domain of human ephrin type-A receptor 8 (EPHA8)
Walker JR, Yermekbayeva L, Kania J, Bountra C, Weigelt J, Arrowsmith CH, Edwards AM, Bochkarev A, Dhe-Paganon S, Structural Genomics Consortium (SGC)
To be published
Source organism: Homo sapiens  
Bound ligands: GOL    BME    SO4   
Modified residues: PTR    PTR   
Assembly name: Ephrin type-A receptor 8 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-151404 (Preferred)   search this ID
PDBe-KB: P29322   
X-ray diffraction
2.15Å resolution
Released: 15 Dec 2009
Model geometry
Fit model/data
3kul
3kul
3kul
Entries 1 to 3 of 3
Entries 1 to 3 of 3