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X-ray diffraction
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Authors
(45)
Walter MR
(5)
Logsdon NJ
(3)
Jones BC
(2)
Josephson K
(2)
Schalk-Hihi C
(2)
Wlodawer A
(2)
Yoon SI
(2)
Zdanov A
(2)
Abhiraman GC
(1)
Aduri NG
(1)
Bagger M
(1)
DeLarosa D
(1)
DiDonato M
(1)
DiGiacomo R
(1)
Donnelly RP
(1)
Fathman JW
(1)
Garcia KC
(1)
Gati C
(1)
Geierstanger B
(1)
Gustchina A
(1)
Henneberg LT
(1)
Indelicato SR
(1)
Jamontt J
(1)
Jones DH
(1)
Josepson K
(1)
Junt T
(1)
Knuth M
(1)
Kuenze G
(1)
Logsdon N
(1)
Meeusen S
(1)
Mohan K
(1)
Nagabhushan TL
(1)
Peters E
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Picard D
(1)
Saxton RA
(1)
Sheikh F
(1)
Simpson CT
(1)
Sommer U
(1)
Spraggon G
(1)
Su LL
(1)
Tsang M
(1)
Tsutsumi N
(1)
Vo T
(1)
Walter LJ
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Weatherbee J
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Homo / hetero assembly
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homo
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protein structure
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(5)
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dimer
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tetramer
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(1)
trimer
(1)
Resolution distribution
1.5 - 2
(5)
2.0 - 2.5
(2)
2.5 - 3
(2)
3.0 - 3.5
(1)
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1990 - 1995
(1)
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(3)
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CSIF
(10)
Cytokine synthesis inhibitory factor
(10)
IL-10
(10)
Interleukin-10
(10)
IG-light kappa chain
(1)
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(10)
Gene names
(3)
IL10
(9)
Il-10
(1)
Il10
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Interacting Molecules
(5)
Interleukin-10 receptor subunit alpha
(3)
Ig gamma-1 chain C region
(1)
Ig kappa chain C region, B allele
(1)
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(1)
Interleukin-10 receptor subunit beta
(1)
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EDO : 1,2-ETHANEDIOL
(1)
SO4 : SULFATE ION
(1)
Function and Biology
Biological function
(5)
cytokine activity
(10)
interleukin-10 receptor binding
(8)
protein dimerization activity
(8)
growth factor activity
(7)
protein binding
(7)
Biological process
(74)
immune response
(10)
branching involved in labyrinthine layer morphogenesis
(8)
cellular response to estradiol stimulus
(8)
cellular response to hepatocyte growth factor stimulus
(8)
cellular response to lipopolysaccharide
(8)
chronic inflammatory response to antigenic stimulus
(8)
defense response to bacterium
(8)
defense response to protozoan
(8)
interleukin-10-mediated signaling pathway
(8)
liver regeneration
(8)
negative regulation of B cell proliferation
(8)
negative regulation of MHC class II biosynthetic process
(8)
negative regulation of apoptotic process
(8)
negative regulation of autophagy
(8)
negative regulation of cell population proliferation
(8)
negative regulation of chronic inflammatory response to antigenic stimulus
(8)
negative regulation of cytokine production
(8)
negative regulation of cytokine production involved in immune response
(8)
negative regulation of endothelial cell apoptotic process
(8)
negative regulation of heterotypic cell-cell adhesion
(8)
negative regulation of inflammatory response
(8)
negative regulation of interleukin-12 production
(8)
negative regulation of interleukin-6 production
(8)
negative regulation of membrane protein ectodomain proteolysis
(8)
negative regulation of myeloid dendritic cell activation
(8)
negative regulation of neuron apoptotic process
(8)
negative regulation of nitric oxide biosynthetic process
(8)
negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
(8)
negative regulation of tumor necrosis factor production
(8)
negative regulation of type II interferon production
(8)
negative regulation of vascular associated smooth muscle cell proliferation
(8)
positive regulation of B cell apoptotic process
(8)
positive regulation of DNA-templated transcription
(8)
positive regulation of MHC class II biosynthetic process
(8)
positive regulation of cell cycle
(8)
positive regulation of cytokine production
(8)
positive regulation of endothelial cell proliferation
(8)
positive regulation of immunoglobulin production
(8)
positive regulation of macrophage activation
(8)
positive regulation of miRNA transcription
(8)
positive regulation of plasma cell differentiation
(8)
positive regulation of receptor signaling pathway via JAK-STAT
(8)
positive regulation of sprouting angiogenesis
(8)
positive regulation of transcription by RNA polymerase II
(8)
regulation of cytokine production
(8)
regulation of gene expression
(8)
regulation of response to wounding
(8)
regulation of synapse organization
(8)
response to activity
(8)
response to carbon monoxide
(8)
response to glucocorticoid
(8)
response to inactivity
(8)
response to insulin
(8)
response to lipopolysaccharide
(8)
response to molecule of bacterial origin
(8)
response to xenobiotic stimulus
(8)
B cell differentiation
(7)
B cell proliferation
(7)
endothelial cell apoptotic process
(7)
hemopoiesis
(7)
leukocyte chemotaxis
(7)
negative regulation of T cell proliferation
(7)
negative regulation of chemokine (C-C motif) ligand 5 production
(7)
negative regulation of cytokine activity
(7)
negative regulation of interferon-alpha production
(7)
negative regulation of interleukin-1 production
(7)
negative regulation of interleukin-18 production
(7)
negative regulation of interleukin-8 production
(7)
negative regulation of mitotic cell cycle
(7)
positive regulation of heterotypic cell-cell adhesion
(7)
positive regulation of vascular associated smooth muscle cell proliferation
(7)
regulation of complement-dependent cytotoxicity
(7)
regulation of isotype switching
(7)
type 2 immune response
(7)
Biological cell component
(2)
extracellular region
(10)
extracellular space
(8)
Sequence and Structure classification
SCOP fold
(1)
4-helical cytokines
(7)
SCOP family
(1)
Interferons/interleukin-10 (IL-10)
(7)
CATH class
(1)
Mainly Alpha
(8)
CATH topology
(1)
Growth Hormone; Chain: A;
(8)
Pfam accession / name
(1)
PF00726 : IL10
(10)
Experimental Information
Diffraction protocol
(1)
Single wavelength
(6)
Diffraction radiation source type
(1)
Synchrotron
(8)
Diffraction source
(6)
EMBL/DESY, HAMBURG BEAMLINE BW7B
(2)
SSRL BEAMLINE BL9-2
(2)
ALS BEAMLINE 5.0.3
(1)
BESSY BEAMLINE 14.1
(1)
NSLS BEAMLINE X4A
(1)
SSRL BEAMLINE BL9-1
(1)
Synchrotron site
(5)
SSRL
(3)
EMBL/DESY, Hamburg
(2)
ALS
(1)
BESSY
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NSLS
(1)
Diffraction detector type
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Image plate
(5)
CCD
(4)
Refinement software
(6)
CNS
(4)
PHENIX
(2)
PROFFT
(2)
X-PLOR
(2)
REFMAC
(1)
phenix.real_space_refine
(1)
EM microscope model
(1)
FEI TITAN KRIOS
(1)
EM detector name
(1)
GATAN K3 (6k x 4k)
(1)
Representative Structures
Representative Structures
Entries
Macromolecules
Compounds
Protein families
Entries 1 to 10 of 10
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Structure of Monomeric Interleukin-10 Grafted into and Antibody CDR
DiDonato M, Spraggon G
Structure
(2025)
[PMID: 39798572 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Assembly name:
IG-heavy chain and Interleukin-10
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-272738 (Preferred)
search this ID
X-ray structure of mouse interleukin-10 mutant - S1_E8del, C149Y
Kuenze G
To be published
Source organism: Mus musculus
Assembly composition: protein only structure
Assembly name:
Interleukin-10
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-148471 (Preferred)
search this ID

Crystal structure of human IL-10 complexed with the soluble IL-10R1 chain
Yoon SI, Jones BC, Josepson K, Logsdon NJ, Walter MR
Structure
(2005)
[PMID: 15837194 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Assembly name:
Interleukin-10 complex and Interleukin-10 receptor subunit alpha
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-149581 (Preferred)
search this ID
HUMAN IL-10 / IL-10R1 COMPLEX
Josephson K, Logsdon N, Walter MR
Immunity
(2001)
[PMID: 11485736 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Assembly name:
Interleukin-10 complex and Interleukin-10 receptor subunit alpha
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-149581 (Preferred)
search this ID
CYTOKINE SYNTHESIS
Walter MR
Biochemistry
(1995)
[PMID: 7547951 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Interleukin-10 complex
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-149579 (Preferred)
search this ID

CRYSTAL STRUCTURE OF HUMAN INTERLEUKIN-10 AT 1.6 ANGSTROMS RESOLUTION
Zdanov A, Schalk-Hihi C, Wlodawer A
Protein Sci
(1996)
[PMID: 8897595 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Bound ligands:
SO4
Assembly name:
Interleukin-10 complex
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-149579 (Preferred)
search this ID

Crystal structure of human IL-10
Yoon SI, Walter MR
J Biol Chem
(2006)
[PMID: 16982608 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Interleukin-10 complex
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-149579 (Preferred)
search this ID

ENGINEERED HUMAN INTERLEUKIN-10 MONOMER COMPLEXED TO 9D7 FAB FRAGMENT
Josephson K, Jones BC, Walter LJ, DiGiacomo R, Indelicato SR, Walter MR
Structure
(2002)
[PMID: 12121653 ]
Source organisms: Rattus norvegicus , Homo sapiens
Assembly composition: protein/protein complex
PDBe complex ID:
PDB-CPX-134654 (Preferred)
search this ID
Interleukin-10 signaling complex with IL-10RA and IL-10RB
Saxton RA, Tsutsumi N, Gati C, Garcia KC
Science
(2021)
[PMID: 33737461 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Assembly name:
Interleukin-10 receptor-ligand complex
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-279862 (Preferred)
search this ID
INTERLEUKIN-10 CRYSTAL STRUCTURE REVEALS THE FUNCTIONAL DIMER WITH AN UNEXPECTED TOPOLOGICAL SIMILARITY TO INTERFERON GAMMA
Zdanov A, Schalk-Hihi C, Gustchina A, Wlodawer A
Structure
(1995)
[PMID: 8590020 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Interleukin-10 complex
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-149579 (Preferred)
search this ID

Entries 1 to 10 of 10