MiMS / NDPIA Bioinformatics Workshop - Umea, Sweden
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Date:
Tuesday 10 - Thursday 19 November 2015Venue:
Department of Computing Science, University of Umea - MIT-Huset, 901 87, Umea, SwedenParticipation:
By invitationContact:
Anna HolmstromRegistration fee:
£0Registration closed
Dates additional information:
There are two sets of workshops, Week 1: 10-12th November, Week 2: 17-19th November, 2015.Course Overview
This workshop will provide participants with the opportunity to learn about a range of EMBL-EBI resources across the life-sciences, from genomics through to protein structure.
Audience
This workshop has been designed for for students and postdoctoral researchers who are part of the MiMS national doctoral programme in infections and antibiotics (NDPIA). No prior knowledge of bioinformatics is required to undertake these workshops.
Learning outcomes
After this course you should be able to:
- Access and explore a range of EMBL-EBI tools and resources
- Know where to access further support and help with each resource
Programme
Half Day workshops - 10th - 12th November, 2015
|
Morning (8:30 – 12:00 |
Tuesday 10th |
Wednesday 11th |
Thursday 12th |
|
Group 1 |
Intro to EBI resources |
Protein function and classification |
Interactions and pathways |
|
Group 2 |
Intro to EBI resources |
Protein sequence databases |
Intro to sequence searching |
|
Afternoon (13:00 – 16:30) |
Tuesday 10th |
Wednesday 11th |
Thursday 12th |
|
Group 1 |
Protein Sequence databases |
Intro to sequence searching |
Standards and ontologies |
|
Group 2 |
Protein function and classification |
Standards and ontologies |
Interactions and pathways |
Full day workshops - 17th - 19th November, 2015
|
Whole day (08:30 – 16:30) |
Tuesday 17th |
Wednesday 18th |
Thursday 19th |
|
Group 1 |
Protein structures and tools from the PDBe |
Ensembl Genomes |
Array Express / Expression Atlas |
|
Group 2 |
Ensembl Genomes |
Array Express / Expression Atlas |
Protein structures and tools from the PDBe |
Additional information:
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