IHECRE00001882.6 LIVE JSON
| Type | Composite |
| Status | Partial |
| Project | ENCODE |
| Description | Reference epigenome for human skeletal muscle myoblast-derived myotube |
| Previous versions | IHECRE00001882.5 IHECRE00001882.4 IHECRE00001882.3 IHECRE00001882.2 IHECRE00001882.1 |
Metadata
| Disease ontology curie | ncim:C115222 |
| Biomaterial type | Primary Cell Culture |
| Disease ontology uri | https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C115222 |
| Passage if expanded | NA |
| Donor age unit | year |
| Taxon id | 9606 |
| Species | Homo sapiens |
| Disease | NA |
| Sample ontology uri | http://purl.obolibrary.org/obo/CL_0002372 |
| Donor health status ontology uri | https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C115222 |
| Donor health status ontology curie | ncim:C115222 |
| Treatment | NA |
| Culture conditions | unknown |
| Sample ontology curie | cl:0002372 |
| Cell type | myotube |
| Markers | unknown |
| Donor health status | NA |
Raw data
| Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
|---|---|---|---|---|---|
| ChIP-Seq | Transcription Factor | ENCODE | ENCSR000ANS | None | https://www.encodeproject.org/experiments/ENCSR000ANS |
| DNase-Hypersensitivity | Chromatin Accessibility | ENCODE | ENCSR000EOP | None | https://www.encodeproject.org/experiments/ENCSR000EOP |
| ChIP-Seq | ChIP-Seq Input | ENCODE | ENCSR000ANT | None | https://www.encodeproject.org/experiments/ENCSR000ANT |
| ChIP-Seq | Histone H3K27ac | ENCODE | ENCSR000ANV | None | https://www.encodeproject.org/experiments/ENCSR000ANV |
| ChIP-Seq | Histone H3K9me3 | ENCODE | ENCSR000AQM | None | https://www.encodeproject.org/experiments/ENCSR000AQM |
| ChIP-Seq | Histone H3K4me1 | ENCODE | ENCSR000ANX | None | https://www.encodeproject.org/experiments/ENCSR000ANX |
| ChIP-Seq | Histone H3K36me3 | ENCODE | ENCSR000ANW | None | https://www.encodeproject.org/experiments/ENCSR000ANW |
| ChIP-Seq | Histone H3K4me3 | ENCODE | ENCSR000ANZ | None | https://www.encodeproject.org/experiments/ENCSR000ANZ |
| ChIP-Seq | Histone H3K27me3 | ENCODE | ENCSR000ATI | None | https://www.encodeproject.org/experiments/ENCSR000ATI |
| RNA-Seq | total-RNA-Seq | ENCODE | ENCSR828TEI | None | https://www.encodeproject.org/experiments/ENCSR828TEI |