IHECRE00001882.6 LIVE JSON
Type | Composite |
Status | Partial |
Project | ENCODE |
Description | Reference epigenome for human skeletal muscle myoblast-derived myotube |
Previous versions | IHECRE00001882.5 IHECRE00001882.4 IHECRE00001882.3 IHECRE00001882.2 IHECRE00001882.1 |
Metadata
Disease ontology curie | ncim:C115222 |
Biomaterial type | Primary Cell Culture |
Disease ontology uri | https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C115222 |
Passage if expanded | NA |
Donor age unit | year |
Taxon id | 9606 |
Species | Homo sapiens |
Disease | NA |
Sample ontology uri | http://purl.obolibrary.org/obo/CL_0002372 |
Donor health status ontology uri | https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C115222 |
Donor health status ontology curie | ncim:C115222 |
Treatment | NA |
Culture conditions | unknown |
Sample ontology curie | cl:0002372 |
Cell type | myotube |
Markers | unknown |
Donor health status | NA |
Raw data
Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
---|---|---|---|---|---|
ChIP-Seq | Transcription Factor | ENCODE | ENCSR000ANS | None | https://www.encodeproject.org/experiments/ENCSR000ANS |
DNase-Hypersensitivity | Chromatin Accessibility | ENCODE | ENCSR000EOP | None | https://www.encodeproject.org/experiments/ENCSR000EOP |
ChIP-Seq | ChIP-Seq Input | ENCODE | ENCSR000ANT | None | https://www.encodeproject.org/experiments/ENCSR000ANT |
ChIP-Seq | Histone H3K27ac | ENCODE | ENCSR000ANV | None | https://www.encodeproject.org/experiments/ENCSR000ANV |
ChIP-Seq | Histone H3K9me3 | ENCODE | ENCSR000AQM | None | https://www.encodeproject.org/experiments/ENCSR000AQM |
ChIP-Seq | Histone H3K4me1 | ENCODE | ENCSR000ANX | None | https://www.encodeproject.org/experiments/ENCSR000ANX |
ChIP-Seq | Histone H3K36me3 | ENCODE | ENCSR000ANW | None | https://www.encodeproject.org/experiments/ENCSR000ANW |
ChIP-Seq | Histone H3K4me3 | ENCODE | ENCSR000ANZ | None | https://www.encodeproject.org/experiments/ENCSR000ANZ |
ChIP-Seq | Histone H3K27me3 | ENCODE | ENCSR000ATI | None | https://www.encodeproject.org/experiments/ENCSR000ATI |
RNA-Seq | total-RNA-Seq | ENCODE | ENCSR828TEI | None | https://www.encodeproject.org/experiments/ENCSR828TEI |