IHECRE00003703.6 LIVE JSON
Type | Single donor |
Status | Complete |
Project | ENCODE |
Description | Reference epigenome for mouse limb (10.5 day embryonic) |
Previous versions | IHECRE00003703.5 IHECRE00003703.4 IHECRE00003703.3 IHECRE00003703.2 IHECRE00003703.1 |
Metadata
Disease ontology curie | ncim:C115222 |
Biomaterial type | Primary Tissue |
Donor id | ENCDO956IXV |
Disease ontology uri | https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C115222 |
Donor life stage | embryonic |
Donor ethnicity | NA |
Donor sex | Mixed |
Donor age unit | day |
Tissue type | limb |
Taxon id | 10090 |
Species | Mus musculus |
Disease | NA |
Sample ontology uri | http://purl.obolibrary.org/obo/UBERON_0002101 |
Donor age | 10 |
Donor health status ontology uri | https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C115222 |
Collection method | unknown |
Donor health status ontology curie | ncim:C115222 |
Treatment | NA |
Sample ontology curie | uberon:0002101 |
Tissue depot | limb |
Donor health status | NA |
Raw data
Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
---|---|---|---|---|---|
ChIP-Seq | Histone H3K4me1 | ENCODE | ENCSR238SGC | None | https://www.encodeproject.org/experiments/ENCSR238SGC |
ChIP-Seq | Histone H3K36me3 | ENCODE | ENCSR242PHH | None | https://www.encodeproject.org/experiments/ENCSR242PHH |
ChIP-Seq | Histone H3K4me3 | ENCODE | ENCSR318QFY | None | https://www.encodeproject.org/experiments/ENCSR318QFY |
Bisulfite-Seq | DNA Methylation | ENCODE | ENCSR377CZO | None | https://www.encodeproject.org/experiments/ENCSR377CZO |
ChIP-Seq | ChIP-Seq Input | ENCODE | ENCSR687ALB | None | https://www.encodeproject.org/experiments/ENCSR687ALB |
miRNA-Seq | smRNA-Seq | ENCODE | ENCSR715NEZ | None | https://www.encodeproject.org/experiments/ENCSR715NEZ |
ChIP-Seq | Histone H3K27ac | ENCODE | ENCSR863VHE | None | https://www.encodeproject.org/experiments/ENCSR863VHE |
ChIP-Seq | Histone H3K9me3 | ENCODE | ENCSR890ACP | None | https://www.encodeproject.org/experiments/ENCSR890ACP |
ChIP-Seq | Histone H3K27me3 | ENCODE | ENCSR906RTN | None | https://www.encodeproject.org/experiments/ENCSR906RTN |
RNA-Seq | mRNA-Seq | ENCODE | ENCSR968QHO | None | https://www.encodeproject.org/experiments/ENCSR968QHO |
DNase-Hypersensitivity | Chromatin Accessibility | ENCODE | ENCSR380VCU | None | https://www.encodeproject.org/experiments/ENCSR380VCU |