IHECRE00004706.5 LIVE JSON
| Type | Composite |
| Status | Partial |
| Project | ENCODE |
| Description | Reference epigenome for mouse cortical plate (8 week adult) |
| Previous versions | IHECRE00004706.4 IHECRE00004706.3 IHECRE00004706.2 IHECRE00004706.1 |
Metadata
| Disease ontology curie | ncim:C115222 |
| Biomaterial type | Primary Tissue |
| Disease ontology uri | https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C115222 |
| Donor life stage | adult |
| Donor ethnicity | NA |
| Donor age unit | week |
| Tissue type | cortical plate |
| Taxon id | 10090 |
| Species | Mus musculus |
| Disease | unknown |
| Sample ontology uri | http://purl.obolibrary.org/obo/UBERON_0005343 |
| Donor age | 8 |
| Donor health status ontology uri | https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C115222 |
| Collection method | unknown |
| Donor health status ontology curie | ncim:C115222 |
| Treatment | NA |
| Sample ontology curie | uberon:0005343 |
| Tissue depot | cortical plate |
| Donor health status | unknown |
Raw data
| Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
|---|---|---|---|---|---|
| RNA-Seq | mRNA-Seq | ENCODE | ENCSR000BZR | None | https://www.encodeproject.org/experiments/ENCSR000BZR |
| ChIP-Seq | Transcription Factor | ENCODE | ENCSR000CBO | None | https://www.encodeproject.org/experiments/ENCSR000CBO |
| ChIP-Seq | Transcription Factor | ENCODE | ENCSR000CBP | None | https://www.encodeproject.org/experiments/ENCSR000CBP |
| ChIP-Seq | ChIP-Seq Input | ENCODE | ENCSR000CAU | None | https://www.encodeproject.org/experiments/ENCSR000CAU |
| ChIP-Seq | Histone H3K4me1 | ENCODE | ENCSR000CAI | None | https://www.encodeproject.org/experiments/ENCSR000CAI |
| ChIP-Seq | Histone H3K4me3 | ENCODE | ENCSR000CAJ | None | https://www.encodeproject.org/experiments/ENCSR000CAJ |
| ChIP-Seq | Histone H3K27ac | ENCODE | ENCSR000CDD | None | https://www.encodeproject.org/experiments/ENCSR000CDD |