GO:0000463
JSON
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Biological Process
Definition (GO:0000463 GONUTS page)
Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0000463
Child Term | Relationship to GO:0000463 |
---|---|
endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
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part_of |
generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
part_of |
generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
part_of |
cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
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part_of |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q6MG08 | 10116 | ABCF1_RAT | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q6P542 | 10090 | ABCF1_MOUSE | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q767L0 | 9823 | ABCF1_PIG | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q7YR37 | 9598 | ABCF1_PANTR | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q8NE71-2 | 9606 | ABCF1_HUMAN | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:19570978 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR005998 | Large ribosomal subunit protein uL30, eukaryotic |
InterPro | IPR045059 | Large ribosomal subunit protein uL29, eukaryotes |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0000463 based on ALL annotations
The top 100 of 764 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
3,566.44 | 100.00 | 55,561 | 55,561 |
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
3,376.70 | 36.43 | 20,662 | 21,823 |
PeBoW complex
|
3,544.96 | 21.96 | 12,215 | 12,289 |
ribonucleoprotein complex binding
|
1,627.50 | 16.58 | 11,481 | 25,159 |
preribosome, large subunit precursor
|
863.14 | 16.08 | 18,001 | 74,379 |
snoRNA localization
|
3,382.31 | 10.06 | 5,621 | 5,927 |
pre-snoRNP complex
|
3,333.38 | 10.05 | 5,621 | 6,014 |
ribosomal large subunit biogenesis
|
563.43 | 9.95 | 11,763 | 74,458 |
box C/D snoRNP assembly
|
1,382.22 | 8.74 | 5,634 | 14,537 |
rRNA (guanine) methyltransferase activity
|
1,227.25 | 6.76 | 4,310 | 12,525 |
Totals | 416362 | 72520501 |
No co-occurrence statistics for GO:0000463 based on MANUAL annotations
The top 100 of 183 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
734.41 | 100.00 | 1,922 | 1,922 |
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
706.93 | 14.64 | 283 | 294 |
PeBoW complex
|
701.82 | 14.47 | 280 | 293 |
preribosome, large subunit precursor
|
170.48 | 12.89 | 432 | 1,861 |
snoRNA localization
|
695.38 | 10.14 | 196 | 207 |
pre-snoRNP complex
|
692.04 | 10.13 | 196 | 208 |
box C/D snoRNP assembly
|
203.89 | 8.06 | 196 | 706 |
rRNA binding
|
94.46 | 6.96 | 253 | 1,967 |
rRNA (uridine-2'-O-)-methyltransferase activity
|
411.27 | 6.89 | 140 | 250 |
rRNA (guanine) methyltransferase activity
|
288.00 | 6.55 | 140 | 357 |
Totals | 7851 | 457844 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
2008-05-12 | Deleted | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
2008-04-01 | Updated | RELATION | is a GO:0000470 (maturation of LSU-rRNA) |
2008-03-11 | Updated | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
2007-07-29 | Added | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule. |
2007-07-29 | Added | TERM | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2007-07-29 | Added | TERM | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
2008-05-12 | Deleted | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
2008-03-11 | Updated | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
2007-07-29 | Added | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0000470 (maturation of LSU-rRNA) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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