GO:0000466
JSON
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Biological Process
Definition (GO:0000466 GONUTS page)
Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. PMID:10690410
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0000466
Child Term | Relationship to GO:0000466 |
---|---|
endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
part_of |
exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
part_of |
exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
part_of |
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
part_of |
cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
part_of |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q6MG08 | 10116 | ABCF1_RAT | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q6P542 | 10090 | ABCF1_MOUSE | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q767L0 | 9823 | ABCF1_PIG | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q7YR37 | 9598 | ABCF1_PANTR | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q8NE71-2 | 9606 | ABCF1_HUMAN | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:19570978 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0000466 based on ALL annotations
The top 100 of 502 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
9,080.09 | 100.00 | 21,823 | 21,823 |
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
3,376.70 | 36.43 | 20,662 | 55,561 |
PeBoW complex
|
6,545.00 | 35.08 | 8,858 | 12,289 |
ribonucleoprotein complex binding
|
3,601.50 | 26.97 | 9,979 | 25,159 |
preribosome, large subunit precursor
|
1,902.84 | 19.34 | 15,587 | 74,379 |
rRNA (guanine) methyltransferase activity
|
3,124.57 | 14.35 | 4,310 | 12,525 |
ribosomal large subunit biogenesis
|
1,321.20 | 12.68 | 10,834 | 74,458 |
rRNA (uridine-2'-O-)-methyltransferase activity
|
1,535.20 | 10.02 | 4,310 | 25,492 |
preribosome
|
2,664.58 | 5.57 | 1,403 | 4,781 |
nuclear-transcribed mRNA catabolic process, RNase MRP-dependent
|
3,095.12 | 4.82 | 1,161 | 3,406 |
Totals | 206998 | 37452833 |
No co-occurrence statistics for GO:0000466 based on MANUAL annotations
The top 86 of 86 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
4,801.13 | 100.00 | 294 | 294 |
rRNA (uridine-2'-O-)-methyltransferase activity
|
2,688.63 | 34.65 | 140 | 250 |
rRNA (guanine) methyltransferase activity
|
1,882.80 | 27.40 | 140 | 357 |
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
706.93 | 14.64 | 283 | 1,922 |
rRNA methylation
|
765.56 | 13.57 | 140 | 878 |
preribosome, large subunit precursor
|
479.86 | 9.45 | 186 | 1,861 |
PeBoW complex
|
589.90 | 6.53 | 36 | 293 |
nuclear-transcribed mRNA catabolic process, RNase MRP-dependent
|
1,553.31 | 3.47 | 11 | 34 |
rRNA primary transcript binding
|
341.06 | 2.80 | 13 | 183 |
ribonuclease MRP complex
|
118.41 | 1.51 | 11 | 446 |
Totals | 1725 | 953179 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. |
2008-05-12 | Deleted | DEFINITION | Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. |
2008-04-01 | Updated | RELATION | is a GO:0000460 (maturation of 5.8S rRNA) |
2007-07-29 | Added | DEFINITION | Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. |
2007-07-29 | Added | TERM | maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2007-07-29 | Added | TERM | maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. |
2008-05-12 | Deleted | DEFINITION | Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. |
2007-07-29 | Added | DEFINITION | Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0000460 (maturation of 5.8S rRNA) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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