GO:0000470
JSON
maturation of LSU-rRNA
Biological Process
Definition (GO:0000470 GONUTS page)
Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule.
Ancestor Chart
Ancestor chart for GO:0000470
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0000470
Child Term | Relationship to GO:0000470 |
---|---|
maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
|
is_a |
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)
|
is_a |
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
is_a |
maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
|
is_a |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q6MG08 | 10116 | ABCF1_RAT | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q6P542 | 10090 | ABCF1_MOUSE | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q767L0 | 9823 | ABCF1_PIG | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q7YR37 | 9598 | ABCF1_PANTR | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q8NE71-2 | 9606 | ABCF1_HUMAN | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:19570978 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR039770 | Ribosome biogenesis protein Rpf2 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0000470 based on ALL annotations
The top 100 of 334 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
maturation of LSU-rRNA
|
6,858.23 | 100.00 | 28,893 | 28,893 |
maturation of 5.8S rRNA
|
3,942.24 | 41.21 | 17,125 | 29,792 |
preribosome, large subunit precursor
|
1,591.30 | 20.06 | 17,258 | 74,379 |
rRNA (cytosine-C5-)-methyltransferase activity
|
2,718.43 | 16.11 | 6,166 | 15,556 |
Las1 complex
|
6,026.31 | 14.91 | 4,397 | 5,004 |
rRNA primary transcript binding
|
2,265.86 | 11.50 | 4,334 | 13,118 |
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
650.14 | 6.65 | 5,267 | 55,561 |
RNA methylation
|
300.77 | 3.78 | 6,165 | 140,575 |
ribosomal large subunit assembly
|
213.69 | 2.72 | 5,086 | 163,230 |
rRNA base methylation
|
179.16 | 2.38 | 6,166 | 236,031 |
Totals | 206833 | 47123027 |
No co-occurrence statistics for GO:0000470 based on MANUAL annotations
The top 100 of 124 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
maturation of LSU-rRNA
|
1,121.15 | 100.00 | 1,259 | 1,259 |
maturation of 5.8S rRNA
|
734.38 | 45.34 | 750 | 1,145 |
preribosome, large subunit precursor
|
293.39 | 18.50 | 487 | 1,861 |
assembly of large subunit precursor of preribosome
|
968.54 | 12.84 | 165 | 191 |
tRNA methyltransferase activator activity
|
1,086.39 | 9.90 | 125 | 129 |
tRNA (m2G10) methyltransferase complex
|
1,030.47 | 9.84 | 125 | 136 |
ribosomal subunit export from nucleus
|
379.51 | 9.82 | 153 | 452 |
rRNA (cytosine-C5-)-methyltransferase activity
|
902.94 | 9.32 | 120 | 149 |
positive regulation of rRNA processing
|
596.36 | 9.13 | 125 | 235 |
ribosomal large subunit binding
|
177.57 | 7.38 | 153 | 966 |
Totals | 5598 | 776437 |
Change Log
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- Definition / Synonyms
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Timestamp | Action | Category | Detail |
---|---|---|---|
2011-02-15 | Added | RELATION | part of GO:0042273 (ribosomal large subunit biogenesis) |
2008-05-13 | Added | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule. |
2008-05-12 | Deleted | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule. |
2008-04-01 | Updated | RELATION | is a GO:0006364 (rRNA processing) |
2007-07-29 | Added | TERM | maturation of LSU-rRNA |
2007-07-29 | Added | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2007-07-29 | Added | TERM | maturation of LSU-rRNA |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule. |
2008-05-12 | Deleted | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule. |
2007-07-29 | Added | DEFINITION | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2011-02-15 | Added | RELATION | part of GO:0042273 (ribosomal large subunit biogenesis) |
2008-04-01 | Updated | RELATION | is a GO:0006364 (rRNA processing) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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