This term is obsolete.

GO:0005796 JSON

Golgi lumen

Cellular Component

Definition (GO:0005796 GONUTS page)

The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks.

4,747 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
Golgi apparatus lumen exact

Ancestor Chart

Ancestor chart for GO:0005796
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0005796

Child Term Relationship to
GO:0005796
trans-Golgi network transport vesicle lumen
is_a
Golgi stack lumen
is_a

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0005796 Golgi lumen Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A096MJ18 10116 A0A096MJ18_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A096MK97 10116 A0A096MK97_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0D1E8X3 5270 A0A0D1E8X3_MYCMD GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A0G2JZ79 10116 SIR1_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2K687 10116 A0A0G2K687_RAT GO:0005794 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2K9T0 10116 A0A0G2K9T0_RAT GO:0005794 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A1L8G9S0 8355 A0A1L8G9S0_XENLA GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A1S4L3K3 6945 A0A1S4L3K3_IXOSC GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A1W2Q633 10116 A0A1W2Q633_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A2K5ATM2 6239 A0A2K5ATM2_CAEEL GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033

Cross-references

Database ID Description
UniProtKB-SubCell SL-0133 Golgi apparatus lumen

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0005796 based on ALL annotations
The top 100 of 1,739 co-occurring terms
Co-occurring Term PR S% #Together #Compared
Golgi lumen
52,770.94 100.00 3,755 3,755
calcium-ion regulated exocytosis
4,370.73 6.44 841 10,154
glutathione disulfide oxidoreductase activity
3,213.75 5.59 1,513 24,844
cis-Golgi network
2,850.10 5.00 1,517 28,088
fungal-type vacuole
1,660.29 3.00 1,501 47,708
negative regulation of constitutive secretory pathway
52,770.93 2.64 99 99
regulation of retrograde vesicle-mediated transport, Golgi to ER
26,518.06 2.59 100 199
dibasic protein processing
44,289.90 2.49 94 112
nerve growth factor production
26,525.07 2.47 95 189
negative regulation of low-density lipoprotein particle receptor catabolic process
27,255.32 2.45 94 182
Totals 16379 980143
No co-occurrence statistics for GO:0005796 based on MANUAL annotations
The top 100 of 1,177 co-occurring terms
Co-occurring Term PR S% #Together #Compared
Golgi lumen
7,468.43 100.00 189 189
response to dehydroepiandrosterone
3,734.21 9.13 19 38
response to 11-deoxycorticosterone
3,734.21 9.13 19 38
lysosomal lumen
1,252.77 8.18 26 155
zymogen binding
2,542.44 7.27 16 47
extracellular matrix structural constituent conferring compression resistance
2,196.60 4.69 10 34
response to progesterone
477.22 4.15 20 313
endocytic vesicle membrane
616.66 3.11 9 109
response to estradiol
289.47 2.92 20 516
regulation of feeding behavior
792.11 2.82 7 66
Totals 817 20858

Change Log

Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2023-04-24 Added SYNONYM Golgi apparatus lumen
2021-03-02 Deleted RELATION is a GO:0043233 (organelle lumen)
2020-11-03 Added RELATION is a GO:0043233 (organelle lumen)
2019-09-12 Deleted RELATION is a GO:0044431 (obsolete Golgi apparatus part)
2019-09-12 Added RELATION part of GO:0005794 (Golgi apparatus)
2008-10-02 Added RELATION is a GO:0070013 (intracellular organelle lumen)
2008-10-02 Deleted RELATION is a GO:0043233 (organelle lumen)
2008-05-30 Deleted DEFINITION The volume enclosed by the membranes of any cisterna of the Golgi apparatus.
2008-05-30 Added DEFINITION The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks.
Timestamp Action Category Detail
2002-02-06 Updated TERM Golgi lumen
2001-04-03 Updated TERM Golgi lumen
2001-03-30 Added TERM Golgi lumen
Timestamp Action Category Detail
2023-04-24 Added SYNONYM Golgi apparatus lumen
2008-05-30 Deleted DEFINITION The volume enclosed by the membranes of any cisterna of the Golgi apparatus.
2008-05-30 Added DEFINITION The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks.
2008-05-13 Added DEFINITION The volume enclosed by the membranes of any cisterna of the Golgi apparatus.
2008-05-12 Deleted DEFINITION The volume enclosed by the membranes of any cisterna of the Golgi apparatus.
2003-09-13 Added DEFINITION The volume enclosed by the membranes of any cisterna of the Golgi apparatus.
Timestamp Action Category Detail
2021-03-02 Deleted RELATION is a GO:0043233 (organelle lumen)
2020-11-03 Added RELATION is a GO:0043233 (organelle lumen)
2019-09-12 Deleted RELATION is a GO:0044431 (obsolete Golgi apparatus part)
2019-09-12 Added RELATION part of GO:0005794 (Golgi apparatus)
2008-10-02 Added RELATION is a GO:0070013 (intracellular organelle lumen)
2008-10-02 Deleted RELATION is a GO:0043233 (organelle lumen)
2008-04-01 Updated RELATION is a GO:0043233 (organelle lumen)
2008-04-01 Updated RELATION is a GO:0044431 (obsolete Golgi apparatus part)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
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