GO:0005796
JSON
Golgi lumen
Cellular Component
Definition (GO:0005796 GONUTS page)
The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
Golgi apparatus lumen | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0005796
Child Term | Relationship to GO:0005796 |
---|---|
trans-Golgi network transport vesicle lumen
|
is_a |
Golgi stack lumen
|
is_a |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0005796 | Golgi lumen | Only in Taxon | 2759 | Eukaryota |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A096MJ18 | 10116 | A0A096MJ18_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A096MK97 | 10116 | A0A096MK97_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0D1E8X3 | 5270 | A0A0D1E8X3_MYCMD | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A0G2JZ79 | 10116 | SIR1_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K687 | 10116 | A0A0G2K687_RAT | GO:0005794 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K9T0 | 10116 | A0A0G2K9T0_RAT | GO:0005794 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A1L8G9S0 | 8355 | A0A1L8G9S0_XENLA | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A1S4L3K3 | 6945 | A0A1S4L3K3_IXOSC | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A1W2Q633 | 10116 | A0A1W2Q633_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A2K5ATM2 | 6239 | A0A2K5ATM2_CAEEL | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 |
Cross-references
Database | ID | Description |
---|---|---|
UniProtKB-SubCell | SL-0133 | Golgi apparatus lumen |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0005796 based on ALL annotations
The top 100 of 1,739 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
Golgi lumen
|
52,770.94 | 100.00 | 3,755 | 3,755 |
calcium-ion regulated exocytosis
|
4,370.73 | 6.44 | 841 | 10,154 |
glutathione disulfide oxidoreductase activity
|
3,213.75 | 5.59 | 1,513 | 24,844 |
cis-Golgi network
|
2,850.10 | 5.00 | 1,517 | 28,088 |
fungal-type vacuole
|
1,660.29 | 3.00 | 1,501 | 47,708 |
negative regulation of constitutive secretory pathway
|
52,770.93 | 2.64 | 99 | 99 |
regulation of retrograde vesicle-mediated transport, Golgi to ER
|
26,518.06 | 2.59 | 100 | 199 |
dibasic protein processing
|
44,289.90 | 2.49 | 94 | 112 |
nerve growth factor production
|
26,525.07 | 2.47 | 95 | 189 |
negative regulation of low-density lipoprotein particle receptor catabolic process
|
27,255.32 | 2.45 | 94 | 182 |
Totals | 16379 | 980143 |
No co-occurrence statistics for GO:0005796 based on MANUAL annotations
The top 100 of 1,177 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
Golgi lumen
|
7,468.43 | 100.00 | 189 | 189 |
response to dehydroepiandrosterone
|
3,734.21 | 9.13 | 19 | 38 |
response to 11-deoxycorticosterone
|
3,734.21 | 9.13 | 19 | 38 |
lysosomal lumen
|
1,252.77 | 8.18 | 26 | 155 |
zymogen binding
|
2,542.44 | 7.27 | 16 | 47 |
extracellular matrix structural constituent conferring compression resistance
|
2,196.60 | 4.69 | 10 | 34 |
response to progesterone
|
477.22 | 4.15 | 20 | 313 |
endocytic vesicle membrane
|
616.66 | 3.11 | 9 | 109 |
response to estradiol
|
289.47 | 2.92 | 20 | 516 |
regulation of feeding behavior
|
792.11 | 2.82 | 7 | 66 |
Totals | 817 | 20858 |
Change Log
- All changes
- All changes
- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
- Relationships
- Cross-references
- Cross-references
- Other
- Other
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2023-04-24 | Added | SYNONYM | Golgi apparatus lumen |
2021-03-02 | Deleted | RELATION | is a GO:0043233 (organelle lumen) |
2020-11-03 | Added | RELATION | is a GO:0043233 (organelle lumen) |
2019-09-12 | Deleted | RELATION | is a GO:0044431 (obsolete Golgi apparatus part) |
2019-09-12 | Added | RELATION | part of GO:0005794 (Golgi apparatus) |
2008-10-02 | Added | RELATION | is a GO:0070013 (intracellular organelle lumen) |
2008-10-02 | Deleted | RELATION | is a GO:0043233 (organelle lumen) |
2008-05-30 | Deleted | DEFINITION | The volume enclosed by the membranes of any cisterna of the Golgi apparatus. |
2008-05-30 | Added | DEFINITION | The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2002-02-06 | Updated | TERM | Golgi lumen |
2001-04-03 | Updated | TERM | Golgi lumen |
2001-03-30 | Added | TERM | Golgi lumen |
Timestamp | Action | Category | Detail |
---|---|---|---|
2023-04-24 | Added | SYNONYM | Golgi apparatus lumen |
2008-05-30 | Deleted | DEFINITION | The volume enclosed by the membranes of any cisterna of the Golgi apparatus. |
2008-05-30 | Added | DEFINITION | The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks. |
2008-05-13 | Added | DEFINITION | The volume enclosed by the membranes of any cisterna of the Golgi apparatus. |
2008-05-12 | Deleted | DEFINITION | The volume enclosed by the membranes of any cisterna of the Golgi apparatus. |
2003-09-13 | Added | DEFINITION | The volume enclosed by the membranes of any cisterna of the Golgi apparatus. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2021-03-02 | Deleted | RELATION | is a GO:0043233 (organelle lumen) |
2020-11-03 | Added | RELATION | is a GO:0043233 (organelle lumen) |
2019-09-12 | Deleted | RELATION | is a GO:0044431 (obsolete Golgi apparatus part) |
2019-09-12 | Added | RELATION | part of GO:0005794 (Golgi apparatus) |
2008-10-02 | Added | RELATION | is a GO:0070013 (intracellular organelle lumen) |
2008-10-02 | Deleted | RELATION | is a GO:0043233 (organelle lumen) |
2008-04-01 | Updated | RELATION | is a GO:0043233 (organelle lumen) |
2008-04-01 | Updated | RELATION | is a GO:0044431 (obsolete Golgi apparatus part) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
Not found :(
Sorry, but the Term you were trying to view does not exist.
Reported error:
It looks like this may have been caused by:
- a mistyped URL
- an out-of-date link