GO:0006313
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DNA transposition
Biological Process
Definition (GO:0006313 GONUTS page)
A type of transposition in which a transposable element (transposon) is moved to another part of a genome, either by a cut-and-paste mechanism or a replicative mechanism. PMID:26846462 PMID:30416149 PMID:32588192
Secondary IDs
GO:0006317, GO:0006318
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
Class II transposition | exact |
transposition, DNA-mediated | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0006313
Child Term | Relationship to GO:0006313 |
---|---|
non-replicative DNA transposition
|
is_a |
replicative DNA transposition
|
is_a |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR001207 | Transposase, mutator type |
InterPro | IPR001598 | Transposase, IS30, conserved site |
InterPro | IPR002492 | Transposase, Tc1-like |
InterPro | IPR002513 | Tn3 transposase DDE domain |
InterPro | IPR002514 | Transposase IS3/IS911family |
InterPro | IPR002525 | Transposase IS110-like, N-terminal |
InterPro | IPR002559 | Transposase IS4-like domain |
InterPro | IPR002686 | Transposase IS200-like |
InterPro | IPR003220 | InsA N-terminal domain |
InterPro | IPR003346 | Transposase IS116/IS110/IS902, C-terminal |
Replaces
This term can be used instead of these obsolete terms:
GO Identifier | GO Term Name | Reason |
---|---|---|
GO:0000335 | obsolete negative regulation of transposition, DNA-mediated | consider GO:0006313 |
GO:0000336 | obsolete positive regulation of transposition, DNA-mediated | consider GO:0006313 |
GO:0000337 | obsolete regulation of transposition, DNA-mediated | consider GO:0006313 |
GO:0070893 | obsolete transposon integration | consider GO:0006313 |
GO:0070894 | obsolete regulation of transposon integration | consider GO:0006313 |
GO:0070895 | obsolete negative regulation of transposon integration | consider GO:0006313 |
GO:0070896 | obsolete positive regulation of transposon integration | consider GO:0006313 |
GO:0032198 | obsolete MITE transposition | replaced_by GO:0006313 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0006313 based on ALL annotations
The top 100 of 2,220 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
DNA transposition
|
412.77 | 100.00 | 472,271 | 472,271 |
transposase activity
|
392.77 | 78.17 | 384,482 | 404,062 |
transposition
|
229.49 | 19.19 | 107,044 | 192,534 |
tyrosine-based site-specific recombinase activity
|
405.17 | 11.85 | 56,086 | 57,138 |
DNA recombination
|
40.05 | 8.37 | 178,629 | 1,840,794 |
DNA integration
|
42.50 | 7.50 | 102,190 | 992,544 |
chromosome segregation
|
56.01 | 6.69 | 55,096 | 406,033 |
site-specific recombinase activity
|
405.32 | 5.11 | 24,155 | 24,599 |
DNA binding
|
11.92 | 2.88 | 446,193 | 15,456,294 |
cell division
|
13.26 | 2.58 | 55,108 | 1,715,239 |
Totals | 2010531 | 249134059 |
No co-occurrence statistics for GO:0006313 based on MANUAL annotations
The top 14 of 14 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
DNA transposition
|
39,145.42 | 100.00 | 33 | 33 |
transposase activity
|
9,252.56 | 17.33 | 13 | 55 |
P-element binding
|
13,048.48 | 2.86 | 1 | 3 |
DNA insertion or deletion binding
|
7,829.09 | 2.70 | 1 | 5 |
RNA-directed DNA polymerase activity
|
1,077.40 | 2.16 | 3 | 109 |
DNA integration
|
2,174.75 | 2.00 | 1 | 18 |
transposition
|
1,701.98 | 1.82 | 1 | 23 |
DNA recombination
|
65.57 | 0.16 | 1 | 597 |
chromosome
|
40.78 | 0.10 | 2 | 1,920 |
protein-DNA complex
|
32.92 | 0.08 | 1 | 1,189 |
Totals | 69 | 260330 |
Change Log
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- Definition / Synonyms
- Definition / Synonyms
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- Cross-references
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Timestamp | Action | Category | Detail |
---|---|---|---|
2023-03-06 | Deleted | SYNONYM | Tc1/mariner transposition |
2023-03-06 | Deleted | SYNONYM | P-element transposition |
2023-03-06 | Deleted | SYNONYM | P-element excision |
2023-03-06 | Added | XREF | Wikipedia:Transposable_element |
2023-03-06 | Added | XREF | Wikipedia:Transposase |
2023-03-06 | Deleted | SYNONYM | Tc3 transposition |
2023-03-06 | Updated | TERM | DNA transposition |
2023-03-06 | Added | DEFINITION | A type of transposition in which a transposable element (transposon) is moved to another part of a genome, either by a cut-and-paste mechanism or a replicative mechanism. |
2023-03-06 | Deleted | SYNONYM | DNA transposition |
2023-03-06 | Deleted | DEFINITION | Any process involved in a type of transpositional recombination which occurs via a DNA intermediate. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2023-03-06 | Updated | TERM | DNA transposition |
2006-08-28 | Updated | TERM | transposition, DNA-mediated |
2002-02-06 | Updated | TERM | DNA transposition |
2001-04-03 | Updated | TERM | DNA transposition |
2001-03-30 | Added | TERM | DNA transposition |
Timestamp | Action | Category | Detail |
---|---|---|---|
2023-03-06 | Deleted | SYNONYM | Tc1/mariner transposition |
2023-03-06 | Deleted | SYNONYM | P-element transposition |
2023-03-06 | Deleted | SYNONYM | P-element excision |
2023-03-06 | Deleted | SYNONYM | Tc3 transposition |
2023-03-06 | Added | DEFINITION | A type of transposition in which a transposable element (transposon) is moved to another part of a genome, either by a cut-and-paste mechanism or a replicative mechanism. |
2023-03-06 | Deleted | SYNONYM | DNA transposition |
2023-03-06 | Deleted | DEFINITION | Any process involved in a type of transpositional recombination which occurs via a DNA intermediate. |
2023-03-06 | Added | SYNONYM | transposition, DNA-mediated |
2012-08-09 | Deleted | SYNONYM | cut-and-paste transposition |
2008-05-13 | Added | DEFINITION | Any process involved in a type of transpositional recombination which occurs via a DNA intermediate. |
2008-05-12 | Deleted | DEFINITION | Any process involved in a type of transpositional recombination which occurs via a DNA intermediate. |
2007-10-12 | Added | SYNONYM | DNA transposition |
2007-08-09 | Deleted | SYNONYM | cut-and-paste transposition |
2007-08-09 | Deleted | SYNONYM | Tc3 transposition |
2007-08-09 | Deleted | SYNONYM | Tc1/mariner transposition |
2007-08-09 | Deleted | SYNONYM | P-element transposition |
2007-08-09 | Deleted | SYNONYM | P-element excision |
2007-08-09 | Added | SYNONYM | cut-and-paste transposition |
2007-08-09 | Deleted | SYNONYM | Class II transposition |
2007-08-09 | Added | SYNONYM | Tc3 transposition |
2007-08-09 | Added | SYNONYM | Tc1/mariner transposition |
2007-08-09 | Added | SYNONYM | P-element transposition |
2007-08-09 | Added | SYNONYM | Class II transposition |
2007-08-09 | Added | SYNONYM | P-element excision |
2006-09-02 | Added | SYNONYM | P-element excision |
2006-08-29 | Updated | DEFINITION | Any process involved in a type of transpositional recombination which occurs via a DNA intermediate. |
2006-08-28 | Added | SYNONYM | Class II transposition |
2006-08-28 | Added | SYNONYM | P-element transposition |
2006-08-28 | Added | SYNONYM | Tc1/mariner transposition |
2006-08-28 | Added | SYNONYM | Tc3 transposition |
2006-08-28 | Added | SYNONYM | cut-and-paste transposition |
2002-11-27 | Added | DEFINITION | The process of transposing (moving to a different location) a segment of a chromosome or a piece of a DNA molecule. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2017-08-13 | Deleted | RELATION | is a GO:0044710 (single-organism metabolic process) |
2013-11-28 | Added | RELATION | is a GO:0044710 (single-organism metabolic process) |
2008-04-19 | Added | RELATION | is a GO:0006310 (DNA recombination) |
2008-04-05 | Deleted | RELATION | is a GO:0006310 (DNA recombination) |
2008-04-01 | Updated | RELATION | is a GO:0032196 (transposition) |
2008-04-01 | Added | RELATION | is a GO:0006310 (DNA recombination) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2023-03-06 | Added | XREF | Wikipedia:Transposable_element |
2023-03-06 | Added | XREF | Wikipedia:Transposase |
Timestamp | Action | Category | Detail |
---|---|---|---|
2006-09-02 | Added | SECONDARY | GO:0006317 (P-element transposition) |
2006-09-02 | Added | SECONDARY | GO:0006318 (P-element excision) |
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