This term is obsolete.

GO:0006313 JSON

DNA transposition

Biological Process

Definition (GO:0006313 GONUTS page)

A type of transposition in which a transposable element (transposon) is moved to another part of a genome, either by a cut-and-paste mechanism or a replicative mechanism. PMID:26846462 PMID:30416149 PMID:32588192

Secondary IDs

GO:0006317, GO:0006318

473,212 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
Class II transposition exact
transposition, DNA-mediated exact

Ancestor Chart

Ancestor chart for GO:0006313
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0006313

Child Term Relationship to
GO:0006313
non-replicative DNA transposition
is_a
replicative DNA transposition
is_a

Cross-references

Database ID Description
InterPro IPR001207 Transposase, mutator type
InterPro IPR001598 Transposase, IS30, conserved site
InterPro IPR002492 Transposase, Tc1-like
InterPro IPR002513 Tn3 transposase DDE domain
InterPro IPR002514 Transposase IS3/IS911family
InterPro IPR002525 Transposase IS110-like, N-terminal
InterPro IPR002559 Transposase IS4-like domain
InterPro IPR002686 Transposase IS200-like
InterPro IPR003220 InsA N-terminal domain
InterPro IPR003346 Transposase IS116/IS110/IS902, C-terminal

Replaces

This term can be used instead of these obsolete terms:

GO Identifier GO Term Name Reason
GO:0000335 obsolete negative regulation of transposition, DNA-mediated consider GO:0006313
GO:0000336 obsolete positive regulation of transposition, DNA-mediated consider GO:0006313
GO:0000337 obsolete regulation of transposition, DNA-mediated consider GO:0006313
GO:0070893 obsolete transposon integration consider GO:0006313
GO:0070894 obsolete regulation of transposon integration consider GO:0006313
GO:0070895 obsolete negative regulation of transposon integration consider GO:0006313
GO:0070896 obsolete positive regulation of transposon integration consider GO:0006313
GO:0032198 obsolete MITE transposition replaced_by GO:0006313

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0006313 based on ALL annotations
The top 100 of 2,220 co-occurring terms
Co-occurring Term PR S% #Together #Compared
DNA transposition
412.77 100.00 472,271 472,271
transposase activity
392.77 78.17 384,482 404,062
transposition
229.49 19.19 107,044 192,534
tyrosine-based site-specific recombinase activity
405.17 11.85 56,086 57,138
DNA recombination
40.05 8.37 178,629 1,840,794
DNA integration
42.50 7.50 102,190 992,544
chromosome segregation
56.01 6.69 55,096 406,033
site-specific recombinase activity
405.32 5.11 24,155 24,599
DNA binding
11.92 2.88 446,193 15,456,294
cell division
13.26 2.58 55,108 1,715,239
Totals 2010531 249134059
No co-occurrence statistics for GO:0006313 based on MANUAL annotations
The top 14 of 14 co-occurring terms
Co-occurring Term PR S% #Together #Compared
DNA transposition
39,145.42 100.00 33 33
transposase activity
9,252.56 17.33 13 55
P-element binding
13,048.48 2.86 1 3
DNA insertion or deletion binding
7,829.09 2.70 1 5
RNA-directed DNA polymerase activity
1,077.40 2.16 3 109
DNA integration
2,174.75 2.00 1 18
transposition
1,701.98 1.82 1 23
DNA recombination
65.57 0.16 1 597
chromosome
40.78 0.10 2 1,920
protein-DNA complex
32.92 0.08 1 1,189
Totals 69 260330

Change Log

Timestamp Action Category Detail
2023-03-06 Deleted SYNONYM Tc1/mariner transposition
2023-03-06 Deleted SYNONYM P-element transposition
2023-03-06 Deleted SYNONYM P-element excision
2023-03-06 Added XREF Wikipedia:Transposable_element
2023-03-06 Added XREF Wikipedia:Transposase
2023-03-06 Deleted SYNONYM Tc3 transposition
2023-03-06 Updated TERM DNA transposition
2023-03-06 Added DEFINITION A type of transposition in which a transposable element (transposon) is moved to another part of a genome, either by a cut-and-paste mechanism or a replicative mechanism.
2023-03-06 Deleted SYNONYM DNA transposition
2023-03-06 Deleted DEFINITION Any process involved in a type of transpositional recombination which occurs via a DNA intermediate.
Timestamp Action Category Detail
2023-03-06 Updated TERM DNA transposition
2006-08-28 Updated TERM transposition, DNA-mediated
2002-02-06 Updated TERM DNA transposition
2001-04-03 Updated TERM DNA transposition
2001-03-30 Added TERM DNA transposition
Timestamp Action Category Detail
2023-03-06 Deleted SYNONYM Tc1/mariner transposition
2023-03-06 Deleted SYNONYM P-element transposition
2023-03-06 Deleted SYNONYM P-element excision
2023-03-06 Deleted SYNONYM Tc3 transposition
2023-03-06 Added DEFINITION A type of transposition in which a transposable element (transposon) is moved to another part of a genome, either by a cut-and-paste mechanism or a replicative mechanism.
2023-03-06 Deleted SYNONYM DNA transposition
2023-03-06 Deleted DEFINITION Any process involved in a type of transpositional recombination which occurs via a DNA intermediate.
2023-03-06 Added SYNONYM transposition, DNA-mediated
2012-08-09 Deleted SYNONYM cut-and-paste transposition
2008-05-13 Added DEFINITION Any process involved in a type of transpositional recombination which occurs via a DNA intermediate.
2008-05-12 Deleted DEFINITION Any process involved in a type of transpositional recombination which occurs via a DNA intermediate.
2007-10-12 Added SYNONYM DNA transposition
2007-08-09 Deleted SYNONYM cut-and-paste transposition
2007-08-09 Deleted SYNONYM Tc3 transposition
2007-08-09 Deleted SYNONYM Tc1/mariner transposition
2007-08-09 Deleted SYNONYM P-element transposition
2007-08-09 Deleted SYNONYM P-element excision
2007-08-09 Added SYNONYM cut-and-paste transposition
2007-08-09 Deleted SYNONYM Class II transposition
2007-08-09 Added SYNONYM Tc3 transposition
2007-08-09 Added SYNONYM Tc1/mariner transposition
2007-08-09 Added SYNONYM P-element transposition
2007-08-09 Added SYNONYM Class II transposition
2007-08-09 Added SYNONYM P-element excision
2006-09-02 Added SYNONYM P-element excision
2006-08-29 Updated DEFINITION Any process involved in a type of transpositional recombination which occurs via a DNA intermediate.
2006-08-28 Added SYNONYM Class II transposition
2006-08-28 Added SYNONYM P-element transposition
2006-08-28 Added SYNONYM Tc1/mariner transposition
2006-08-28 Added SYNONYM Tc3 transposition
2006-08-28 Added SYNONYM cut-and-paste transposition
2002-11-27 Added DEFINITION The process of transposing (moving to a different location) a segment of a chromosome or a piece of a DNA molecule.
Timestamp Action Category Detail
2017-08-13 Deleted RELATION is a GO:0044710 (single-organism metabolic process)
2013-11-28 Added RELATION is a GO:0044710 (single-organism metabolic process)
2008-04-19 Added RELATION is a GO:0006310 (DNA recombination)
2008-04-05 Deleted RELATION is a GO:0006310 (DNA recombination)
2008-04-01 Updated RELATION is a GO:0032196 (transposition)
2008-04-01 Added RELATION is a GO:0006310 (DNA recombination)
Timestamp Action Category Detail
2023-03-06 Added XREF Wikipedia:Transposable_element
2023-03-06 Added XREF Wikipedia:Transposase
Timestamp Action Category Detail
2006-09-02 Added SECONDARY GO:0006317 (P-element transposition)
2006-09-02 Added SECONDARY GO:0006318 (P-element excision)
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